SMTL ID : 6zyf.1 (1 other biounit)

Notum_Ghrelin complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: N.19, S.21, V.22, S.116, E.133 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.19, A:S.116

1 x K4Q: [(2~{S})-2-azanyl-3-oxidanylidene-propyl] octanoate(Non-covalent)

K4Q.2: 12 residues within 4Å: Chain A: G.49, G.50, W.51, Y.52, A.155, A.156, F.191, I.214, F.242, F.243, H.312, E.313 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.51, A:Y.52, A:F.191, A:I.214, A:F.243 Hydrogen bonds: A:G.50, A:W.51, A:W.51, A:A.156 Salt bridges: A:H.312

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, Y. et al., Notum deacylates octanoylated ghrelin. Mol Metab (2021)

Release Date

2021-03-10

Peptides

Palmitoleoyl-protein carboxylesterase NOTUM: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Palmitoleoyl-protein carboxylesterase NOTUM

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