SMTL ID : 6zyy.1

Outer Dynein Arm-Shulin complex - Dyh3 motor region (Tetrahymena thermophila)

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

3 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 13 residues within 4Å: Chain A: L.1845, C.1846, A.1874, G.1875, T.1876, G.1877, K.1878, T.1879, E.1880, I.2007, L.2048, R.2049, D.2249 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:C.1846, A:C.1846, A:G.1875, A:T.1876, A:G.1877, A:K.1878, A:T.1879, A:T.1879, A:E.1880 Salt bridges: A:K.1878, A:R.2049, A:R.2049 ADP.3: 14 residues within 4Å: Chain A: L.2460, L.2461, T.2463, G.2494, S.2495, G.2496, T.2497, A.2498, K.2499, T.2500, S.2501, I.2643, M.2696, R.2697 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:L.2461, A:L.2461, A:G.2496, A:T.2497, A:A.2498, A:K.2499, A:T.2500, A:T.2500, A:S.2501, A:R.2697 Salt bridges: A:R.2697, A:R.2697 ADP.4: 12 residues within 4Å: Chain A: P.2838, V.2840, V.2868, G.2869, G.2870, S.2871, G.2872, K.2873, Q.2874, S.2875, W.3030, K.3090 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:V.2840, A:V.2840, A:G.2870, A:S.2871, A:G.2872, A:K.2873, A:Q.2874, A:Q.2874, A:S.2875 Salt bridges: A:K.2873

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 18 residues within 4Å: Chain A: Y.2129, L.2130, I.2131, F.2136, G.2160, S.2161, G.2162, K.2163, S.2164, T.2165, E.2273, L.2298, A.2302, V.2303, H.2483, T.2484, R.2624, R.2627 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:I.2131, A:I.2131, A:G.2160, A:S.2161, A:G.2162, A:K.2163, A:S.2164, A:S.2164, A:T.2165, A:T.2165, A:E.2273 Salt bridges: A:K.2163, A:K.2163, A:R.2624, A:R.2627, A:R.2627

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mali, G.R. et al., Shulin packages axonemal outer dynein arms for ciliary targeting. Science (2021)

Release Date

2021-02-03

Peptides

Dynein heavy chain, outer arm protein: A
Shulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
Y

Dynein heavy chain, outer arm protein

Shulin

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