- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY 1.22 Å
- Oligo State
- homo-24-mer
- Ligands
- 24 x FE: FE (III) ION(Non-covalent)
- 24 x ZN: ZINC ION(Non-covalent)
ZN.2: 5 residues within 4Å:- Chain A: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.23, A:E.58, A:H.61, H2O.1, H2O.1
ZN.4: 5 residues within 4Å:- Chain B: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.23, B:E.58, B:H.61, H2O.5, H2O.5
ZN.6: 5 residues within 4Å:- Chain C: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:E.23, C:E.58, C:H.61, H2O.9, H2O.9
ZN.8: 5 residues within 4Å:- Chain D: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:E.23, D:E.58, D:H.61, H2O.13, H2O.14
ZN.10: 5 residues within 4Å:- Chain E: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain E, 2 Ligand-Water interactions- Metal complexes: E:E.23, E:E.58, E:H.61, H2O.18, H2O.18
ZN.12: 5 residues within 4Å:- Chain F: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain F, 2 Ligand-Water interactions- Metal complexes: F:E.23, F:E.58, F:H.61, H2O.22, H2O.22
ZN.14: 5 residues within 4Å:- Chain G: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain G, 2 Ligand-Water interactions- Metal complexes: G:E.23, G:E.58, G:H.61, H2O.26, H2O.26
ZN.16: 5 residues within 4Å:- Chain H: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain H, 2 Ligand-Water interactions- Metal complexes: H:E.23, H:E.58, H:H.61, H2O.30, H2O.31
ZN.18: 5 residues within 4Å:- Chain I: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain I, 2 Ligand-Water interactions- Metal complexes: I:E.23, I:E.58, I:H.61, H2O.35, H2O.35
ZN.20: 5 residues within 4Å:- Chain J: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain J, 2 Ligand-Water interactions- Metal complexes: J:E.23, J:E.58, J:H.61, H2O.39, H2O.39
ZN.22: 5 residues within 4Å:- Chain K: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain K, 2 Ligand-Water interactions- Metal complexes: K:E.23, K:E.58, K:H.61, H2O.43, H2O.43
ZN.24: 5 residues within 4Å:- Chain L: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain L, 2 Ligand-Water interactions- Metal complexes: L:E.23, L:E.58, L:H.61, H2O.47, H2O.47
ZN.26: 5 residues within 4Å:- Chain M: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain M, 2 Ligand-Water interactions- Metal complexes: M:E.23, M:E.58, M:H.61, H2O.52, H2O.52
ZN.28: 5 residues within 4Å:- Chain N: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain N, 2 Ligand-Water interactions- Metal complexes: N:E.23, N:E.58, N:H.61, H2O.56, H2O.56
ZN.30: 5 residues within 4Å:- Chain O: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain O, 2 Ligand-Water interactions- Metal complexes: O:E.23, O:E.58, O:H.61, H2O.60, H2O.60
ZN.32: 5 residues within 4Å:- Chain P: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain P, 2 Ligand-Water interactions- Metal complexes: P:E.23, P:E.58, P:H.61, H2O.64, H2O.64
ZN.34: 5 residues within 4Å:- Chain Q: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain Q, 2 Ligand-Water interactions- Metal complexes: Q:E.23, Q:E.58, Q:H.61, H2O.68, H2O.69
ZN.36: 5 residues within 4Å:- Chain R: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain R, 2 Ligand-Water interactions- Metal complexes: R:E.23, R:E.58, R:H.61, H2O.73, H2O.73
ZN.38: 5 residues within 4Å:- Chain S: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain S, 2 Ligand-Water interactions- Metal complexes: S:E.23, S:E.58, S:H.61, H2O.77, H2O.77
ZN.40: 5 residues within 4Å:- Chain T: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain T, 2 Ligand-Water interactions- Metal complexes: T:E.23, T:E.58, T:H.61, H2O.81, H2O.81
ZN.42: 5 residues within 4Å:- Chain U: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain U, 2 Ligand-Water interactions- Metal complexes: U:E.23, U:E.58, U:H.61, H2O.85, H2O.86
ZN.44: 5 residues within 4Å:- Chain V: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain V, 2 Ligand-Water interactions- Metal complexes: V:E.23, V:E.58, V:H.61, H2O.90, H2O.90
ZN.46: 5 residues within 4Å:- Chain W: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain W, 2 Ligand-Water interactions- Metal complexes: W:E.23, W:E.58, W:H.61, H2O.94, H2O.94
ZN.48: 5 residues within 4Å:- Chain X: E.23, E.58, H.61, V.106, Q.137
5 PLIP interactions:3 interactions with chain X, 2 Ligand-Water interactions- Metal complexes: X:E.23, X:E.58, X:H.61, H2O.98, H2O.98
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakane, T. et al., Single-particle cryo-EM at atomic resolution. Nature (2020)
- Release Date
- 2020-10-28
- Peptides
- Ferritin heavy chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY 1.22 Å
- Oligo State
- homo-24-mer
- Ligands
- 24 x FE: FE (III) ION(Non-covalent)
- 24 x ZN: ZINC ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakane, T. et al., Single-particle cryo-EM at atomic resolution. Nature (2020)
- Release Date
- 2020-10-28
- Peptides
- Ferritin heavy chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A