SMTL ID : 7a50.1

Crystal structure of the APH coiled-coil in complex with nanobody Nb26

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-2-2-mer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: G.116, T.117, Q.118 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.117, A:Q.118 Water bridges: A:G.116 EDO.2: 2 residues within 4Å: Chain C: T.117, Q.118 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:T.117, C:T.117, C:Q.118 EDO.3: 4 residues within 4Å: Chain C: R.103, Y.104, D.105 Chain D: E.18 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Majerle, A. et al., A nanobody toolbox targeting dimeric coiled-coil modules for functionalization of designed protein origami structures. Proc.Natl.Acad.Sci.USA (2021)

Release Date

2021-05-05

Peptides

Nanobody Nb26: AC
Coiled-coil APH: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Nanobody Nb26

Coiled-coil APH

Related Entries With Identical Sequence