SMTL ID : 7agk.2 (1 other biounit)

Crystal structure of E. coli SF kinase (YihV) in complex with product sulfofructose phosphate (SFP)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.97 Å

Oligo State

homo-dimer

Ligands

2 x RAH: [(2~{S},3~{S},4~{S},5~{R})-3,4,5-tris(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]methanesulfonic acid(Non-covalent)

RAH.1: 13 residues within 4Å: Chain A: V.11, D.13, G.38, G.39, P.40, S.95, I.107, N.109, R.138, D.162, G.241, D.244 Chain B: K.27 13 PLIP interactions: 10 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:D.13, A:G.39, A:S.95, A:S.95, A:N.109, A:G.241, A:D.244, A:D.244, A:D.244, B:K.27 Salt bridges: A:R.138, B:K.27, B:K.27 RAH.2: 15 residues within 4Å: Chain A: K.27 Chain B: I.9, V.11, D.13, G.38, G.39, P.40, S.95, I.97, I.107, N.109, R.138, D.162, G.243, D.244 13 PLIP interactions: 3 interactions with chain A, 10 interactions with chain B Hydrogen bonds: A:K.27, B:D.13, B:G.39, B:S.95, B:S.95, B:N.109, B:G.243, B:D.244, B:D.244, B:D.244 Salt bridges: A:K.27, A:K.27, B:R.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sharma, M. et al., Molecular Basis of Sulfosugar Selectivity in Sulfoglycolysis. Acs Cent.Sci. (2021)

Release Date

2021-04-14

Peptides

Sulfofructose kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Sulfofructose kinase

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