SMTL ID : 7atq.2 (1 other biounit)

Structure of EstD11 in complex with cyclohexane carboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.59 Å

Oligo State

monomer

Ligands

2 x RXK: cyclohexanecarboxylic acid(Non-covalent)

RXK.1: 4 residues within 4Å: Chain A: Y.221, A.222, D.223, R.250 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:D.223 Water bridges: A:D.223, A:D.223 RXK.2: 8 residues within 4Å: Chain A: L.31, M.34, T.85, H.86, D.143, M.193, A.272, F.273 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.31, A:F.273 Hydrogen bonds: A:H.86

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.3: 3 residues within 4Å: Chain A: V.49, D.50, P.55 1 PLIP interactions: 1 interactions with chain A Water bridges: A:V.49

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.4: 7 residues within 4Å: Chain A: G.75, G.76, G.77, S.144, A.145, M.202, H.268 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.76, A:G.77, A:S.144, A:A.145 Salt bridges: A:H.268

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miguel-Ruano, V. et al., Biochemical and Structural Characterization of a novel thermophilic esterase EstD11 provide catalytic insights for the HSL family. Comput Struct Biotechnol J (2021)

Release Date

2021-03-03

Peptides

EstD11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

EstD11

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