SMTL ID : 7ayy.2 (4 other biounits)

Structure of the human 8-oxoguanine DNA Glycosylase hOGG1 in complex with activator TH10785

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x SEQ: ~{N}-cyclohexyl-2-cyclopropyl-quinazolin-4-amine(Non-covalent)

SEQ.1: 14 residues within 4Å: Chain A: S.51, G.52, Q.53, F.55, N.160, I.162, I.165, L.266, P.276, D.278, M.281, Q.325, A.326, F.329 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Q.53, A:F.55, A:I.162, A:I.165, A:L.266, A:A.326, A:F.329, A:F.329, A:F.329 Hydrogen bonds: A:G.52 pi-Stacking: A:F.329

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2: 4 residues within 4Å: Chain A: V.256, G.257, T.258, K.259 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.258, A:T.258, A:K.259 Water bridges: A:G.257, A:V.260, A:N.306 Salt bridges: A:K.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Michel, M. et al., Small-molecule activation of OGG1 increases oxidative DNA damage repair by gaining a new function. Science (2022)

Release Date

2022-06-01

Peptides

N-glycosylase/DNA lyase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
BBB

N-glycosylase/DNA lyase

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