SMTL ID : 7b5q.1

Cryo-EM structure of the human CAK bound to ICEC0942 (PHENIX-OPLS3e)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x I74: (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol(Non-covalent)

I74.1: 19 residues within 4Å: Chain C: L.63, G.64, V.71, A.84, K.86, I.120, F.136, D.137, F.138, M.139, E.140, T.141, D.142, V.145, N.186, N.187, L.189, A.199, D.200 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:L.63, C:V.71, C:A.84, C:I.120, C:F.136, C:F.136, C:D.142, C:L.189, C:A.199 Hydrogen bonds: C:M.139, C:M.139, C:N.187 Water bridges: C:L.63, C:D.142

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Greber, B.J. et al., 2.5 angstrom -resolution structure of human CDK-activating kinase bound to the clinical inhibitor ICEC0942. Biophys.J. (2021)

Release Date

2021-02-10

Peptides

CDK-activating kinase assembly factor MAT1: A
Cyclin-H: B
Cyclin-dependent kinase 7: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
I

C
J

CDK-activating kinase assembly factor MAT1

Cyclin-H

Cyclin-dependent kinase 7

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