SMTL ID : 7egb.1

TFIID-based holo PIC on SCP promoter

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-2-2-2-1-1-2-2-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
16 x ZN: ZINC ION(Non-covalent)
1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Chen, X. et al., Structural insights into preinitiation complex assembly on core promoters. Science (2021)
Release Date
2021-05-05
Peptides
CDK-activating kinase assembly factor MAT1: A
General transcription factor IIH subunit 1: B
General transcription factor IIH subunit 2: C
General transcription factor IIH subunit 3: D
General transcription factor IIH subunit 4: E
General transcription factor IIH subunit 5: F
General transcription and DNA repair factor IIH helicase subunit XPB: G
General transcription and DNA repair factor IIH helicase subunit XPD: H
Cyclin-dependent kinase 7: I
Cyclin-H: J
Transcription initiation factor TFIID subunit 1: K
Transcription initiation factor TFIID subunit 2: L
Transcription initiation factor TFIID subunit 4: M5
Transcription initiation factor TFIID subunit 5: N6
Transcription initiation factor TFIID subunit 6: O7
Transcription initiation factor TFIID subunit 7: P
Transcription initiation factor TFIID subunit 8: Q
Transcription initiation factor TFIID subunit 9: R8
Transcription initiation factor TFIID subunit 10: S9
Transcription initiation factor TFIID subunit 12: Tb
Transcription initiation factor IIA subunit 2: U
TATA-box-binding protein: V
Transcription initiation factor IIA subunit 1: W
Transcription initiation factor IIB: X
General transcription factor IIF subunit 1: Y
General transcription factor IIF subunit 2: Z
General transcription factor IIE subunit 1: 0
Transcription initiation factor IIE subunit beta: 1
Transcription initiation factor TFIID subunit 3: 4
Transcription initiation factor TFIID subunit 11: a
Transcription initiation factor TFIID subunit 13: c
DNA-directed RNA polymerase II subunit RPB1: d
DNA-directed RNA polymerase subunit beta: e
DNA-directed RNA polymerase II subunit RPB3: f
DNA-directed RNA polymerase II subunit RPB4: g
DNA-directed RNA polymerase II subunit E: h
DNA-directed RNA polymerase II subunit F: i
DNA-directed RNA polymerase II subunit RPB7: j
DNA-directed RNA polymerases I, II, and III subunit RPABC3: k
DNA-directed RNA polymerase II subunit RPB9: l
RPB10: m
RNA_pol_L_2 domain-containing protein: n
RPB12: o
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
0
B
1
C
2
D
3
E
4
F
5
G
6
H
7
I
8
J
9
K
A
L
B
M
D
5
d
N
E
6
e
O
F
7
f
P
G
Q
H
R
I
8
i
S
J
9
j
T
L
b
l
U
O
V
P
W
Q
X
R
Y
S
Z
T
0
U
1
V
4
c
a
k
c
m
d
o
e
p
f
q
g
r
h
s
i
t
j
u
k
v
l
w
m
x
n
y
o
z

CDK-activating kinase assembly factor MAT1

General transcription factor IIH subunit 1

General transcription factor IIH subunit 2

General transcription factor IIH subunit 3

General transcription factor IIH subunit 4

General transcription factor IIH subunit 5

General transcription and DNA repair factor IIH helicase subunit XPB

General transcription and DNA repair factor IIH helicase subunit XPD

Cyclin-dependent kinase 7

Cyclin-H

Transcription initiation factor TFIID subunit 1

Transcription initiation factor TFIID subunit 2

Transcription initiation factor TFIID subunit 4

Transcription initiation factor TFIID subunit 5

Transcription initiation factor TFIID subunit 6

Transcription initiation factor TFIID subunit 7

Transcription initiation factor TFIID subunit 8

Transcription initiation factor TFIID subunit 9

Transcription initiation factor TFIID subunit 10

Transcription initiation factor TFIID subunit 12

Transcription initiation factor IIA subunit 2

TATA-box-binding protein

Transcription initiation factor IIA subunit 1

Transcription initiation factor IIB

General transcription factor IIF subunit 1

General transcription factor IIF subunit 2

General transcription factor IIE subunit 1

Transcription initiation factor IIE subunit beta

Transcription initiation factor TFIID subunit 3

Transcription initiation factor TFIID subunit 11

Transcription initiation factor TFIID subunit 13

DNA-directed RNA polymerase II subunit RPB1

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase II subunit RPB3

DNA-directed RNA polymerase II subunit RPB4

DNA-directed RNA polymerase II subunit E

DNA-directed RNA polymerase II subunit F

DNA-directed RNA polymerase II subunit RPB7

DNA-directed RNA polymerases I, II, and III subunit RPABC3

DNA-directed RNA polymerase II subunit RPB9

RPB10

RNA_pol_L_2 domain-containing protein

RPB12

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