SMTL ID : 7bjy.1 (1 other biounit)

Crystal structure of the first bromodomain (BD1) of human BRDT bound to Ro3280

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

monomer

Ligands

1 x 79C: 4-[(9-cyclopentyl-7,7-difluoro-5-methyl-6-oxo-6,7,8,9-tetrahydro-5H-pyrimido[4,5-b][1,4]diazepin-2-yl)amino]-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide(Non-covalent)

79C.1: 11 residues within 4Å: Chain A: W.26, P.27, F.28, V.32, L.37, L.39, Y.42, C.81, Y.84, N.85, I.91 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.91 Hydrogen bonds: A:N.85 pi-Stacking: A:W.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karim, R.M. et al., Differential BET Bromodomain Inhibition by Dihydropteridinone and Pyrimidodiazepinone Kinase Inhibitors. J.Med.Chem. (2021)

Release Date

2021-08-25

Peptides

Isoform 2 of Bromodomain testis-specific protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Isoform 2 of Bromodomain testis-specific protein

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