SMTL ID : 7bkb.1

Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from Methanospirillum hungatei (hexameric, composite structure)

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-2-2-2-2-2-2-2-2-2-mer

Ligands

48 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 11 residues within 4Å: Chain A: L.401, C.402, S.405, R.406, C.416, S.417, R.418, C.420, C.421, D.446, R.448 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.402, A:C.416, A:C.420, A:C.421 SF4.3: 9 residues within 4Å: Chain A: C.14, C.16, I.20, Q.46, Y.47, C.49, C.74, F.83, R.103 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.14, A:C.16, A:C.49, A:C.74 SF4.4: 12 residues within 4Å: Chain A: L.609, C.610, Y.612, A.614, L.615, C.633, K.634, G.635, C.636, G.637, C.639, M.650 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.610, A:C.633, A:C.636, A:C.639 SF4.5: 10 residues within 4Å: Chain A: C.600, A.601, G.602, C.603, G.604, C.606, F.642, C.643, A.647, I.648 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.600, A:C.603, A:C.606, A:C.643 SF4.6: 12 residues within 4Å: Chain A: V.245, G.260, C.261, N.262, G.263, C.264, G.265, C.267, Y.301, C.318, K.321, I.324 6 PLIP interactions: 6 interactions with chain A, Salt bridges: A:D.266 pi-Cation interactions: A:Y.301 Metal complexes: A:C.261, A:C.264, A:C.267, A:C.318 SF4.7: 13 residues within 4Å: Chain A: C.271, P.272, V.273, A.288, I.289, C.308, V.309, K.310, C.311, G.312, L.313, C.314, L.326 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.271, A:C.308, A:C.311, A:C.314 SF4.9: 7 residues within 4Å: Chain A: P.644 Chain C: V.300, C.306, C.308, C.311, S.312, H.337 4 PLIP interactions: 4 interactions with chain C, Metal complexes: C:C.306, C:C.308, C:C.311, C:H.337 SF4.10: 13 residues within 4Å: Chain C: C.293, I.294, K.295, C.296, Y.297, A.298, C.299, F.330, H.331, C.352, P.353, I.356, N.358 4 PLIP interactions: 4 interactions with chain C, Metal complexes: C:C.293, C:C.296, C:C.299, C:C.352 SF4.11: 13 residues within 4Å: Chain C: C.303, P.304, I.305, R.334, V.338, C.342, I.343, N.344, C.345, G.346, C.348, A.359, M.362 4 PLIP interactions: 4 interactions with chain C, Metal complexes: C:C.303, C:C.342, C:C.345, C:C.348 SF4.12: 11 residues within 4Å: Chain C: K.101, G.102, C.103, C.129, G.131, N.189, C.190, C.193, M.195, K.196, N.344 4 PLIP interactions: 4 interactions with chain C, Metal complexes: C:C.103, C:C.129, C:C.190, C:C.193 SF4.14: 12 residues within 4Å: Chain D: C.54, P.55, Y.62, I.64, C.88, T.89, T.90, C.91, Y.92, S.93, C.94, T.105 4 PLIP interactions: 4 interactions with chain D, Metal complexes: D:C.54, D:C.88, D:C.91, D:C.94 SF4.15: 12 residues within 4Å: Chain D: C.44, Y.45, Q.46, C.47, G.48, T.49, C.50, R.65, M.68, C.98, P.99, P.104 5 PLIP interactions: 5 interactions with chain D, pi-Cation interactions: D:Y.45 Metal complexes: D:C.44, D:C.47, D:C.50, D:C.98 SF4.18: 10 residues within 4Å: Chain F: C.15, Y.17, C.18, G.21, C.22, L.49, C.50, K.52, G.53, L.184 4 PLIP interactions: 4 interactions with chain F, Metal complexes: F:C.15, F:C.18, F:C.22, F:C.50 SF4.19: 11 residues within 4Å: Chain H: C.83, P.84, V.85, I.101, Y.102, C.119, A.120, G.121, C.122, G.123, C.125 4 PLIP interactions: 4 interactions with chain H, Metal complexes: H:C.83, H:C.119, H:C.122, H:C.125 SF4.20: 12 residues within 4Å: Chain H: V.68, C.73, T.74, C.76, N.77, N.78, C.79, A.109, C.129, Y.131, V.133, I.134 4 PLIP interactions: 4 interactions with chain H, Metal complexes: H:C.73, H:C.76, H:C.79, H:C.129 SF4.23: 10 residues within 4Å: Chain K: F.276, C.281, P.282, C.285, T.287, C.288, C.333, P.334, G.335, I.338 5 PLIP interactions: 5 interactions with chain K, Metal complexes: K:C.281, K:C.285, K:C.285, K:C.288, K:C.333 SF4.24: 13 residues within 4Å: Chain K: I.274, C.292, P.293, A.296, I.297, V.318, C.323, I.324, L.325, C.326, G.327, C.329, L.341 4 PLIP interactions: 4 interactions with chain K, Metal complexes: K:C.292, K:C.323, K:C.326, K:C.329 SF4.25: 11 residues within 4Å: Chain K: C.47, P.48, E.49, I.52, V.73, C.78, S.79, Y.80, C.81, G.82, C.84 4 PLIP interactions: 4 interactions with chain K, Metal complexes: K:C.47, K:C.78, K:C.81, K:C.84 SF4.26: 10 residues within 4Å: Chain K: C.37, T.38, C.40, I.42, C.43, I.71, C.88, P.89, F.90, L.93 4 PLIP interactions: 4 interactions with chain K, Metal complexes: K:C.37, K:C.40, K:C.43, K:C.88 SF4.27: 11 residues within 4Å: Chain K: I.120, C.125, V.126, R.127, C.128, C.131, V.242, C.259, P.260, T.261, I.264 4 PLIP interactions: 4 interactions with chain K, Metal complexes: K:C.125, K:C.128, K:C.131, K:C.259 SF4.28: 10 residues within 4Å: Chain K: C.135, P.136, A.139, I.140, C.249, C.250, C.252, R.253, C.255, V.266 4 PLIP interactions: 4 interactions with chain K, Metal complexes: K:C.135, K:C.249, K:C.252, K:C.255 SF4.29: 7 residues within 4Å: Chain K: C.184, I.187, C.212, D.213, C.215, N.216, C.218 4 PLIP interactions: 4 interactions with chain K, Metal complexes: K:C.184, K:C.212, K:C.215, K:C.218 SF4.30: 12 residues within 4Å: Chain K: V.169, K.173, C.174, T.175, K.176, C.177, I.179, C.180, C.222, P.223, S.224, A.226 4 PLIP interactions: 4 interactions with chain K, Metal complexes: K:C.174, K:C.177, K:C.180, K:C.222 SF4.34: 10 residues within 4Å: Chain L: C.10, Y.12, C.13, C.15, S.16, C.17, V.37, C.38, P.162, R.163 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:C.10, L:C.13, L:C.17, L:C.38 SF4.35: 11 residues within 4Å: Chain M: L.401, C.402, S.405, R.406, C.416, S.417, R.418, C.420, C.421, D.446, R.448 4 PLIP interactions: 4 interactions with chain M, Metal complexes: M:C.402, M:C.416, M:C.420, M:C.421 SF4.37: 9 residues within 4Å: Chain M: C.14, C.16, I.20, Q.46, Y.47, C.49, C.74, F.83, R.103 4 PLIP interactions: 4 interactions with chain M, Metal complexes: M:C.14, M:C.16, M:C.49, M:C.74 SF4.38: 12 residues within 4Å: Chain M: L.609, C.610, Y.612, A.614, L.615, C.633, K.634, G.635, C.636, G.637, C.639, M.650 4 PLIP interactions: 4 interactions with chain M, Metal complexes: M:C.610, M:C.633, M:C.636, M:C.639 SF4.39: 10 residues within 4Å: Chain M: C.600, A.601, G.602, C.603, G.604, C.606, F.642, C.643, A.647, I.648 4 PLIP interactions: 4 interactions with chain M, Metal complexes: M:C.600, M:C.603, M:C.606, M:C.643 SF4.40: 12 residues within 4Å: Chain M: V.245, G.260, C.261, N.262, G.263, C.264, G.265, C.267, Y.301, C.318, K.321, I.324 6 PLIP interactions: 6 interactions with chain M, Salt bridges: M:D.266 pi-Cation interactions: M:Y.301 Metal complexes: M:C.261, M:C.264, M:C.267, M:C.318 SF4.41: 13 residues within 4Å: Chain M: C.271, P.272, V.273, A.288, I.289, C.308, V.309, K.310, C.311, G.312, L.313, C.314, L.326 4 PLIP interactions: 4 interactions with chain M, Metal complexes: M:C.271, M:C.308, M:C.311, M:C.314 SF4.43: 7 residues within 4Å: Chain M: P.644 Chain O: V.300, C.306, C.308, C.311, S.312, H.337 4 PLIP interactions: 4 interactions with chain O, Metal complexes: O:C.306, O:C.308, O:C.311, O:H.337 SF4.44: 13 residues within 4Å: Chain O: C.293, I.294, K.295, C.296, Y.297, A.298, C.299, F.330, H.331, C.352, P.353, I.356, N.358 4 PLIP interactions: 4 interactions with chain O, Metal complexes: O:C.293, O:C.296, O:C.299, O:C.352 SF4.45: 13 residues within 4Å: Chain O: C.303, P.304, I.305, R.334, V.338, C.342, I.343, N.344, C.345, G.346, C.348, A.359, M.362 4 PLIP interactions: 4 interactions with chain O, Metal complexes: O:C.303, O:C.342, O:C.345, O:C.348 SF4.46: 11 residues within 4Å: Chain O: K.101, G.102, C.103, C.129, G.131, N.189, C.190, C.193, M.195, K.196, N.344 4 PLIP interactions: 4 interactions with chain O, Metal complexes: O:C.103, O:C.129, O:C.190, O:C.193 SF4.48: 12 residues within 4Å: Chain P: C.54, P.55, Y.62, I.64, C.88, T.89, T.90, C.91, Y.92, S.93, C.94, T.105 4 PLIP interactions: 4 interactions with chain P, Metal complexes: P:C.54, P:C.88, P:C.91, P:C.94 SF4.49: 12 residues within 4Å: Chain P: C.44, Y.45, Q.46, C.47, G.48, T.49, C.50, R.65, M.68, C.98, P.99, P.104 5 PLIP interactions: 5 interactions with chain P, pi-Cation interactions: P:Y.45 Metal complexes: P:C.44, P:C.47, P:C.50, P:C.98 SF4.52: 10 residues within 4Å: Chain R: C.15, Y.17, C.18, G.21, C.22, L.49, C.50, K.52, G.53, L.184 4 PLIP interactions: 4 interactions with chain R, Metal complexes: R:C.15, R:C.18, R:C.22, R:C.50 SF4.53: 11 residues within 4Å: Chain T: C.83, P.84, V.85, I.101, Y.102, C.119, A.120, G.121, C.122, G.123, C.125 4 PLIP interactions: 4 interactions with chain T, Metal complexes: T:C.83, T:C.119, T:C.122, T:C.125 SF4.54: 12 residues within 4Å: Chain T: V.68, C.73, T.74, C.76, N.77, N.78, C.79, A.109, C.129, Y.131, V.133, I.134 4 PLIP interactions: 4 interactions with chain T, Metal complexes: T:C.73, T:C.76, T:C.79, T:C.129 SF4.57: 10 residues within 4Å: Chain W: F.276, C.281, P.282, C.285, T.287, C.288, C.333, P.334, G.335, I.338 5 PLIP interactions: 5 interactions with chain W, Metal complexes: W:C.281, W:C.285, W:C.285, W:C.288, W:C.333 SF4.58: 13 residues within 4Å: Chain W: I.274, C.292, P.293, A.296, I.297, V.318, C.323, I.324, L.325, C.326, G.327, C.329, L.341 4 PLIP interactions: 4 interactions with chain W, Metal complexes: W:C.292, W:C.323, W:C.326, W:C.329 SF4.59: 11 residues within 4Å: Chain W: C.47, P.48, E.49, I.52, V.73, C.78, S.79, Y.80, C.81, G.82, C.84 4 PLIP interactions: 4 interactions with chain W, Metal complexes: W:C.47, W:C.78, W:C.81, W:C.84 SF4.60: 10 residues within 4Å: Chain W: C.37, T.38, C.40, I.42, C.43, I.71, C.88, P.89, F.90, L.93 4 PLIP interactions: 4 interactions with chain W, Metal complexes: W:C.37, W:C.40, W:C.43, W:C.88 SF4.61: 10 residues within 4Å: Chain W: I.120, C.125, V.126, R.127, C.128, C.131, C.259, P.260, T.261, I.264 4 PLIP interactions: 4 interactions with chain W, Metal complexes: W:C.125, W:C.128, W:C.131, W:C.259 SF4.62: 13 residues within 4Å: Chain W: C.135, P.136, R.137, A.139, I.140, I.244, C.249, C.250, T.251, C.252, R.253, W.254, C.255 5 PLIP interactions: 5 interactions with chain W, Metal complexes: W:C.135, W:C.249, W:C.250, W:C.252, W:C.255 SF4.63: 8 residues within 4Å: Chain W: C.184, I.187, C.212, D.213, C.215, N.216, C.218, V.229 4 PLIP interactions: 4 interactions with chain W, Metal complexes: W:C.184, W:C.212, W:C.215, W:C.218 SF4.64: 12 residues within 4Å: Chain W: K.173, C.174, T.175, K.176, C.177, I.179, C.180, C.222, P.223, S.224, A.226, I.227 5 PLIP interactions: 5 interactions with chain W, Metal complexes: W:C.174, W:C.177, W:C.177, W:C.180, W:C.222 SF4.68: 10 residues within 4Å: Chain X: C.10, Y.12, C.13, C.15, S.16, C.17, V.37, C.38, P.162, R.163 4 PLIP interactions: 4 interactions with chain X, Metal complexes: X:C.10, X:C.13, X:C.17, X:C.38

4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.2: 36 residues within 4Å: Chain A: V.153, G.154, G.155, G.156, V.157, A.158, I.176, E.177, R.178, T.179, G.184, R.185, L.189, K.191, T.192, F.193, A.343, T.344, G.345, Y.346, A.368, L.369, E.372, F.419, Y.423, K.426, N.514, L.520, G.555, V.556, K.561, D.562, I.563, P.564, T.566 Chain M: K.540 24 PLIP interactions: 23 interactions with chain A, 1 interactions with chain M Hydrophobic interactions: A:L.189, A:Y.346, A:A.368, A:L.369, A:F.419, A:Y.423, A:Y.423 Hydrogen bonds: A:G.155, A:V.157, A:A.158, A:R.178, A:R.178, A:R.185, A:M.186, A:F.193, A:F.193, A:Y.346, A:Y.346, A:K.426, A:V.556, A:K.561, A:I.563, M:K.540 pi-Stacking: A:F.193 FAD.13: 29 residues within 4Å: Chain C: G.21, E.22, C.23, G.24, G.25, A.26, V.27, T.28, L.31, A.45, I.46, T.69, A.70, G.71, S.72, L.73, H.74, G.76, T.99, K.101, V.127, N.128, C.129, G.130, G.131, G.206, N.207, W.208, T.219 28 PLIP interactions: 28 interactions with chain C Hydrogen bonds: C:E.22, C:C.23, C:G.24, C:G.25, C:A.26, C:V.27, C:T.28, C:T.28, C:I.46, C:T.69, C:G.71, C:S.72, C:S.72, C:L.73, C:G.76, C:G.76, C:K.101, C:N.128, C:G.130, C:N.207, C:N.207, C:N.207, C:W.208, C:W.208, C:T.219, C:T.219 pi-Stacking: C:W.208 pi-Cation interactions: C:H.74 FAD.36: 36 residues within 4Å: Chain A: K.540 Chain M: V.153, G.154, G.155, G.156, V.157, A.158, I.176, E.177, R.178, T.179, G.184, R.185, L.189, K.191, T.192, F.193, A.343, T.344, G.345, Y.346, A.368, L.369, E.372, F.419, Y.423, K.426, N.514, L.520, G.555, V.556, K.561, D.562, I.563, P.564, T.566 24 PLIP interactions: 23 interactions with chain M, 1 interactions with chain A Hydrophobic interactions: M:L.189, M:Y.346, M:A.368, M:L.369, M:F.419, M:Y.423, M:Y.423 Hydrogen bonds: M:G.155, M:V.157, M:A.158, M:R.178, M:R.178, M:R.185, M:M.186, M:F.193, M:F.193, M:Y.346, M:K.426, M:V.556, M:K.561, M:I.563, M:T.566, A:K.540 pi-Stacking: M:F.193 FAD.47: 29 residues within 4Å: Chain O: G.21, E.22, C.23, G.24, G.25, A.26, V.27, T.28, L.31, A.45, I.46, T.69, A.70, G.71, S.72, L.73, H.74, G.76, T.99, K.101, V.127, N.128, C.129, G.130, G.131, G.206, N.207, W.208, T.219 28 PLIP interactions: 28 interactions with chain O Hydrogen bonds: O:E.22, O:C.23, O:G.24, O:G.25, O:A.26, O:V.27, O:T.28, O:I.46, O:T.69, O:T.69, O:G.71, O:S.72, O:S.72, O:L.73, O:G.76, O:G.76, O:T.99, O:K.101, O:N.128, O:G.130, O:N.207, O:N.207, O:N.207, O:W.208, O:W.208, O:T.219 pi-Stacking: O:W.208 pi-Cation interactions: O:H.74

2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.8: 9 residues within 4Å: Chain B: C.14, W.16, C.43, T.44, G.67, C.68, C.73, H.74, N.79 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.14, B:C.43, B:C.68, B:C.73 FES.42: 9 residues within 4Å: Chain N: C.14, W.16, C.43, T.44, G.67, C.68, C.73, H.74, N.79 4 PLIP interactions: 4 interactions with chain N, Metal complexes: N:C.14, N:C.43, N:C.68, N:C.73

4 x 9S8: Non-cubane [4Fe-4S]-cluster(Non-covalent)

9S8.16: 10 residues within 4Å: Chain D: G.138 Chain E: G.9, C.10, I.11, C.42, C.43, C.79, G.81, C.82, F.237 6 PLIP interactions: 6 interactions with chain E, Metal complexes: E:C.10, E:C.42, E:C.43, E:C.79, E:C.82, E:C.82 9S8.17: 8 residues within 4Å: Chain E: H.154, G.156, C.157, C.197, C.198, C.235, F.237, C.238 7 PLIP interactions: 7 interactions with chain E, pi-Cation interactions: E:H.158 Metal complexes: E:C.157, E:C.197, E:C.198, E:C.235, E:C.238, E:C.238 9S8.50: 10 residues within 4Å: Chain P: G.138 Chain Q: G.9, C.10, I.11, C.42, C.43, C.79, G.81, C.82, F.237 6 PLIP interactions: 6 interactions with chain Q, Metal complexes: Q:C.10, Q:C.42, Q:C.43, Q:C.79, Q:C.82, Q:C.82 9S8.51: 8 residues within 4Å: Chain Q: H.154, G.156, C.157, C.197, C.198, C.235, F.237, C.238 7 PLIP interactions: 7 interactions with chain Q, pi-Cation interactions: Q:H.158 Metal complexes: Q:C.157, Q:C.197, Q:C.198, Q:C.235, Q:C.238, Q:C.238

4 x ZN: ZINC ION(Non-covalent)

ZN.21: 4 residues within 4Å: Chain I: H.58, H.60, K.184, D.390 3 PLIP interactions: 3 interactions with chain I Metal complexes: I:H.58, I:H.60, I:D.390 ZN.22: 4 residues within 4Å: Chain I: K.184, H.237, H.276, D.390 2 PLIP interactions: 2 interactions with chain I Metal complexes: I:H.237, I:H.276 ZN.55: 4 residues within 4Å: Chain U: H.58, H.60, K.184, D.390 3 PLIP interactions: 3 interactions with chain U Metal complexes: U:H.58, U:H.60, U:D.390 ZN.56: 4 residues within 4Å: Chain U: K.184, H.237, H.276, D.390 2 PLIP interactions: 2 interactions with chain U Metal complexes: U:H.237, U:H.276

2 x MO: MOLYBDENUM ATOM(Non-covalent)

MO.31: 3 residues within 4Å: Chain L: C.122 Ligands: MGD.32, MGD.33 Ligand excluded by PLIP MO.65: 3 residues within 4Å: Chain X: C.122 Ligands: MGD.66, MGD.67 Ligand excluded by PLIP

4 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)

MGD.32: 35 residues within 4Å: Chain J: I.10, Q.12, R.13, A.14, V.15, E.17, G.18, M.21, Q.84 Chain L: Y.12, I.40, C.122, W.153, G.154, S.155, N.156, H.159, A.160, I.189, D.190, P.191, R.192, T.194, V.206, Q.208, G.209, D.211, G.259, M.260, G.261, T.265, G.295, H.296 Ligands: MO.31, MGD.33 22 PLIP interactions: 14 interactions with chain L, 8 interactions with chain J Hydrogen bonds: L:Y.12, L:N.156, L:A.160, L:I.189, L:D.190, L:R.192, L:R.192, L:Q.208, L:G.209, L:M.260, L:G.261, J:Q.12, J:R.13, J:R.13, J:V.15, J:G.18, J:Q.84 Salt bridges: L:H.161, L:D.211, J:R.13, J:E.17 pi-Stacking: L:Y.12 MGD.33: 34 residues within 4Å: Chain J: T.11, R.13, M.21, K.25, Q.84, A.88, N.89, V.92, Y.104 Chain L: S.95, T.96, C.118, I.121, C.122, M.260, H.264, H.296, Y.297, I.348, G.349, T.350, D.351, H.355, I.372, D.373, P.374, S.375, N.377, V.389, C.390, I.391, C.392 Ligands: MO.31, MGD.32 23 PLIP interactions: 6 interactions with chain J, 17 interactions with chain L Hydrogen bonds: J:R.13, J:R.13, J:N.89, J:N.89, L:S.95, L:Y.297, L:G.349, L:T.350, L:D.351, L:D.351, L:H.355, L:I.372, L:D.373, L:D.373, L:S.375, L:N.377, L:C.392 Salt bridges: J:K.25, L:H.296, L:H.296, L:H.355, L:H.355 pi-Stacking: J:Y.104 MGD.66: 35 residues within 4Å: Chain V: I.10, Q.12, R.13, A.14, V.15, E.17, G.18, M.21, Q.84 Chain X: Y.12, I.40, C.122, W.153, G.154, S.155, N.156, H.159, A.160, I.189, D.190, P.191, R.192, T.194, V.206, Q.208, G.209, D.211, G.259, M.260, G.261, T.265, G.295, H.296 Ligands: MO.65, MGD.67 20 PLIP interactions: 12 interactions with chain X, 8 interactions with chain V Hydrogen bonds: X:N.156, X:A.160, X:I.189, X:R.192, X:R.192, X:Q.208, X:G.209, X:M.260, X:G.261, V:Q.12, V:R.13, V:R.13, V:V.15, V:G.18, V:Q.84 Salt bridges: X:H.161, X:D.211, V:R.13, V:E.17 pi-Stacking: X:Y.12 MGD.67: 34 residues within 4Å: Chain V: T.11, R.13, M.21, K.25, Q.84, A.88, N.89, V.92, Y.104 Chain X: S.95, T.96, C.118, I.121, C.122, M.260, H.264, H.296, Y.297, I.348, G.349, T.350, D.351, H.355, I.372, D.373, P.374, S.375, N.377, V.389, C.390, I.391, C.392 Ligands: MO.65, MGD.66 23 PLIP interactions: 17 interactions with chain X, 6 interactions with chain V Hydrogen bonds: X:S.95, X:H.264, X:Y.297, X:G.349, X:D.351, X:D.351, X:H.355, X:H.355, X:I.372, X:D.373, X:S.375, X:N.377, X:C.392, V:R.13, V:R.13, V:N.89, V:N.89 Salt bridges: X:H.296, X:H.296, X:H.355, X:H.355, V:K.25 pi-Stacking: V:Y.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Watanabe, T. et al., Three-megadalton complex of methanogenic electron-bifurcating and CO 2 -fixing enzymes. Science (2021)

Release Date

2021-09-29

Peptides

CoB--CoM heterodisulfide reductase iron-sulfur subunit A: AM
F420-non-reducing hydrogenase subunit D: BN
Formate dehydrogenase, beta subunit (F420): CO
CoB--CoM heterodisulfide reductase subunit C: DP
CoB--CoM heterodisulfide reductase subunit B: EQ
Formate dehydrogenase: FR
Formylmethanofuran dehydrogenase: GS
Formylmethanofuran dehydrogenase, subunit G: HT
Formylmethanofuran dehydrogenase, subunit A: IU
Formylmethanofuran dehydrogenase, subunit D: JV
Formylmethanofuran dehydrogenase, subunit F: KW
Formylmethanofuran dehydrogenase, subunit B: LX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

M
a

B
F

N
f

C
E

O
e

D
C

P
c

E
B

Q
b

F
D

R
d

G
I

S
i

H
L

T
l

I
G

U
g

J
J

V
j

K
K

W
k

L
H

X
h

CoB--CoM heterodisulfide reductase iron-sulfur subunit A

F420-non-reducing hydrogenase subunit D

Formate dehydrogenase, beta subunit (F420)

CoB--CoM heterodisulfide reductase subunit C

CoB--CoM heterodisulfide reductase subunit B

Formate dehydrogenase

Formylmethanofuran dehydrogenase

Formylmethanofuran dehydrogenase, subunit G

Formylmethanofuran dehydrogenase, subunit A

Formylmethanofuran dehydrogenase, subunit D

Formylmethanofuran dehydrogenase, subunit F

Formylmethanofuran dehydrogenase, subunit B

Related Entries With Identical Sequence