SMTL ID : 7bkc.1

Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from Methanospirillum hungatei (dimeric, composite structure)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-2-2-2-2-2-2-2-4-2-mer

Ligands

48 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 11 residues within 4Å: Chain A: L.401, C.402, S.405, R.406, C.416, S.417, R.418, C.420, C.421, D.446, R.448 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.402, A:C.416, A:C.420, A:C.421 SF4.3: 9 residues within 4Å: Chain A: C.14, C.16, I.20, Q.46, Y.47, C.49, C.74, F.83, R.103 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.14, A:C.16, A:C.49, A:C.74 SF4.4: 12 residues within 4Å: Chain A: L.609, C.610, Y.612, A.614, L.615, C.633, K.634, G.635, C.636, G.637, C.639, M.650 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.610, A:C.633, A:C.636, A:C.639 SF4.5: 10 residues within 4Å: Chain A: C.600, A.601, G.602, C.603, G.604, C.606, F.642, C.643, A.647, I.648 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.600, A:C.603, A:C.606, A:C.643 SF4.6: 12 residues within 4Å: Chain A: V.245, G.260, C.261, N.262, G.263, C.264, G.265, C.267, Y.301, C.318, K.321, I.324 6 PLIP interactions: 6 interactions with chain A, Salt bridges: A:D.266 pi-Cation interactions: A:Y.301 Metal complexes: A:C.261, A:C.264, A:C.267, A:C.318 SF4.7: 13 residues within 4Å: Chain A: C.271, P.272, V.273, A.288, I.289, C.308, V.309, K.310, C.311, G.312, L.313, C.314, L.326 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.271, A:C.308, A:C.311, A:C.314 SF4.9: 7 residues within 4Å: Chain A: P.644 Chain C: V.300, C.306, C.308, C.311, S.312, H.337 4 PLIP interactions: 4 interactions with chain C, Metal complexes: C:C.306, C:C.308, C:C.311, C:H.337 SF4.10: 13 residues within 4Å: Chain C: C.293, I.294, K.295, C.296, Y.297, A.298, C.299, F.330, H.331, C.352, P.353, I.356, N.358 4 PLIP interactions: 4 interactions with chain C, Metal complexes: C:C.293, C:C.296, C:C.299, C:C.352 SF4.11: 13 residues within 4Å: Chain C: C.303, P.304, I.305, R.334, V.338, C.342, I.343, N.344, C.345, G.346, C.348, A.359, M.362 4 PLIP interactions: 4 interactions with chain C, Metal complexes: C:C.303, C:C.342, C:C.345, C:C.348 SF4.12: 11 residues within 4Å: Chain C: K.101, G.102, C.103, C.129, G.131, N.189, C.190, C.193, M.195, K.196, N.344 4 PLIP interactions: 4 interactions with chain C, Metal complexes: C:C.103, C:C.129, C:C.190, C:C.193 SF4.14: 12 residues within 4Å: Chain D: C.54, P.55, Y.62, I.64, C.88, T.89, T.90, C.91, Y.92, S.93, C.94, T.105 4 PLIP interactions: 4 interactions with chain D, Metal complexes: D:C.54, D:C.88, D:C.91, D:C.94 SF4.15: 12 residues within 4Å: Chain D: C.44, Y.45, Q.46, C.47, G.48, T.49, C.50, R.65, M.68, C.98, P.99, P.104 5 PLIP interactions: 5 interactions with chain D, pi-Cation interactions: D:Y.45 Metal complexes: D:C.44, D:C.47, D:C.50, D:C.98 SF4.18: 10 residues within 4Å: Chain F: C.15, Y.17, C.18, G.21, C.22, L.49, C.50, K.52, G.53, L.184 4 PLIP interactions: 4 interactions with chain F, Metal complexes: F:C.15, F:C.18, F:C.22, F:C.50 SF4.19: 11 residues within 4Å: Chain H: C.83, P.84, V.85, I.101, Y.102, C.119, A.120, G.121, C.122, G.123, C.125 4 PLIP interactions: 4 interactions with chain H, Metal complexes: H:C.83, H:C.119, H:C.122, H:C.125 SF4.20: 12 residues within 4Å: Chain H: V.68, C.73, T.74, C.76, N.77, N.78, C.79, A.109, C.129, Y.131, V.133, I.134 4 PLIP interactions: 4 interactions with chain H, Metal complexes: H:C.73, H:C.76, H:C.79, H:C.129 SF4.23: 8 residues within 4Å: Chain K: C.184, I.187, C.212, D.213, C.215, N.216, C.218 Chain L: K.157 4 PLIP interactions: 4 interactions with chain K, Metal complexes: K:C.184, K:C.212, K:C.215, K:C.218 SF4.24: 9 residues within 4Å: Chain K: C.174, T.175, K.176, C.177, I.179, C.180, C.222, P.223, I.227 5 PLIP interactions: 5 interactions with chain K, Metal complexes: K:C.174, K:C.177, K:C.177, K:C.180, K:C.222 SF4.25: 10 residues within 4Å: Chain L: F.276, C.281, P.282, C.285, T.287, C.288, C.333, P.334, G.335, I.338 5 PLIP interactions: 5 interactions with chain L, Metal complexes: L:C.281, L:C.285, L:C.285, L:C.288, L:C.333 SF4.26: 13 residues within 4Å: Chain L: I.274, C.292, P.293, A.296, I.297, V.318, C.323, I.324, L.325, C.326, G.327, C.329, L.341 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:C.292, L:C.323, L:C.326, L:C.329 SF4.27: 11 residues within 4Å: Chain L: C.47, P.48, E.49, I.52, V.73, C.78, S.79, Y.80, C.81, G.82, C.84 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:C.47, L:C.78, L:C.81, L:C.84 SF4.28: 10 residues within 4Å: Chain L: C.37, T.38, C.40, I.42, C.43, I.71, C.88, P.89, F.90, L.93 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:C.37, L:C.40, L:C.43, L:C.88 SF4.29: 9 residues within 4Å: Chain L: I.120, C.125, V.126, C.128, C.131, C.259, P.260, T.261, I.264 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:C.125, L:C.128, L:C.131, L:C.259 SF4.30: 11 residues within 4Å: Chain L: C.135, P.136, R.137, I.140, I.244, C.249, C.250, T.251, C.252, R.253, C.255 4 PLIP interactions: 4 interactions with chain L, Metal complexes: L:C.135, L:C.249, L:C.252, L:C.255 SF4.34: 10 residues within 4Å: Chain M: C.10, Y.12, C.13, C.15, S.16, C.17, V.37, C.38, P.162, R.163 4 PLIP interactions: 4 interactions with chain M, Metal complexes: M:C.10, M:C.13, M:C.17, M:C.38 SF4.35: 11 residues within 4Å: Chain N: L.401, C.402, S.405, R.406, C.416, S.417, R.418, C.420, C.421, D.446, R.448 4 PLIP interactions: 4 interactions with chain N, Metal complexes: N:C.402, N:C.416, N:C.420, N:C.421 SF4.37: 9 residues within 4Å: Chain N: C.14, C.16, I.20, Q.46, Y.47, C.49, C.74, F.83, R.103 4 PLIP interactions: 4 interactions with chain N, Metal complexes: N:C.14, N:C.16, N:C.49, N:C.74 SF4.38: 12 residues within 4Å: Chain N: L.609, C.610, Y.612, A.614, L.615, C.633, K.634, G.635, C.636, G.637, C.639, M.650 4 PLIP interactions: 4 interactions with chain N, Metal complexes: N:C.610, N:C.633, N:C.636, N:C.639 SF4.39: 10 residues within 4Å: Chain N: C.600, A.601, G.602, C.603, G.604, C.606, F.642, C.643, A.647, I.648 4 PLIP interactions: 4 interactions with chain N, Metal complexes: N:C.600, N:C.603, N:C.606, N:C.643 SF4.40: 12 residues within 4Å: Chain N: V.245, G.260, C.261, N.262, G.263, C.264, G.265, C.267, Y.301, C.318, K.321, I.324 6 PLIP interactions: 6 interactions with chain N, Salt bridges: N:D.266 pi-Cation interactions: N:Y.301 Metal complexes: N:C.261, N:C.264, N:C.267, N:C.318 SF4.41: 13 residues within 4Å: Chain N: C.271, P.272, V.273, A.288, I.289, C.308, V.309, K.310, C.311, G.312, L.313, C.314, L.326 4 PLIP interactions: 4 interactions with chain N, Metal complexes: N:C.271, N:C.308, N:C.311, N:C.314 SF4.43: 7 residues within 4Å: Chain N: P.644 Chain P: V.300, C.306, C.308, C.311, S.312, H.337 4 PLIP interactions: 4 interactions with chain P, Metal complexes: P:C.306, P:C.308, P:C.311, P:H.337 SF4.44: 13 residues within 4Å: Chain P: C.293, I.294, K.295, C.296, Y.297, A.298, C.299, F.330, H.331, C.352, P.353, I.356, N.358 4 PLIP interactions: 4 interactions with chain P, Metal complexes: P:C.293, P:C.296, P:C.299, P:C.352 SF4.45: 13 residues within 4Å: Chain P: C.303, P.304, I.305, R.334, V.338, C.342, I.343, N.344, C.345, G.346, C.348, A.359, M.362 4 PLIP interactions: 4 interactions with chain P, Metal complexes: P:C.303, P:C.342, P:C.345, P:C.348 SF4.46: 11 residues within 4Å: Chain P: K.101, G.102, C.103, C.129, G.131, N.189, C.190, C.193, M.195, K.196, N.344 4 PLIP interactions: 4 interactions with chain P, Metal complexes: P:C.103, P:C.129, P:C.190, P:C.193 SF4.48: 12 residues within 4Å: Chain Q: C.54, P.55, Y.62, I.64, C.88, T.89, T.90, C.91, Y.92, S.93, C.94, T.105 4 PLIP interactions: 4 interactions with chain Q, Metal complexes: Q:C.54, Q:C.88, Q:C.91, Q:C.94 SF4.49: 12 residues within 4Å: Chain Q: C.44, Y.45, Q.46, C.47, G.48, T.49, C.50, R.65, M.68, C.98, P.99, P.104 5 PLIP interactions: 5 interactions with chain Q, pi-Cation interactions: Q:Y.45 Metal complexes: Q:C.44, Q:C.47, Q:C.50, Q:C.98 SF4.52: 10 residues within 4Å: Chain S: C.15, Y.17, C.18, G.21, C.22, L.49, C.50, K.52, G.53, L.184 4 PLIP interactions: 4 interactions with chain S, Metal complexes: S:C.15, S:C.18, S:C.22, S:C.50 SF4.53: 11 residues within 4Å: Chain U: C.83, P.84, V.85, I.101, Y.102, C.119, A.120, G.121, C.122, G.123, C.125 4 PLIP interactions: 4 interactions with chain U, Metal complexes: U:C.83, U:C.119, U:C.122, U:C.125 SF4.54: 12 residues within 4Å: Chain U: V.68, C.73, T.74, C.76, N.77, N.78, C.79, A.109, C.129, Y.131, V.133, I.134 4 PLIP interactions: 4 interactions with chain U, Metal complexes: U:C.73, U:C.76, U:C.79, U:C.129 SF4.57: 8 residues within 4Å: Chain X: C.184, I.187, C.212, D.213, C.215, N.216, C.218 Chain Y: K.157 4 PLIP interactions: 4 interactions with chain X, Metal complexes: X:C.184, X:C.212, X:C.215, X:C.218 SF4.58: 9 residues within 4Å: Chain X: C.174, T.175, K.176, C.177, I.179, C.180, C.222, P.223, I.227 5 PLIP interactions: 5 interactions with chain X, Metal complexes: X:C.174, X:C.177, X:C.177, X:C.180, X:C.222 SF4.59: 10 residues within 4Å: Chain Y: F.276, C.281, P.282, C.285, T.287, C.288, C.333, P.334, G.335, I.338 5 PLIP interactions: 5 interactions with chain Y, Metal complexes: Y:C.281, Y:C.285, Y:C.285, Y:C.288, Y:C.333 SF4.60: 13 residues within 4Å: Chain Y: I.274, C.292, P.293, A.296, I.297, V.318, C.323, I.324, L.325, C.326, G.327, C.329, L.341 4 PLIP interactions: 4 interactions with chain Y, Metal complexes: Y:C.292, Y:C.323, Y:C.326, Y:C.329 SF4.61: 11 residues within 4Å: Chain Y: C.47, P.48, E.49, I.52, V.73, C.78, S.79, Y.80, C.81, G.82, C.84 4 PLIP interactions: 4 interactions with chain Y, Metal complexes: Y:C.47, Y:C.78, Y:C.81, Y:C.84 SF4.62: 10 residues within 4Å: Chain Y: C.37, T.38, C.40, I.42, C.43, I.71, C.88, P.89, F.90, L.93 4 PLIP interactions: 4 interactions with chain Y, Metal complexes: Y:C.37, Y:C.40, Y:C.43, Y:C.88 SF4.63: 9 residues within 4Å: Chain Y: I.120, C.125, V.126, C.128, C.131, C.259, P.260, T.261, I.264 4 PLIP interactions: 4 interactions with chain Y, Metal complexes: Y:C.125, Y:C.128, Y:C.131, Y:C.259 SF4.64: 11 residues within 4Å: Chain Y: C.135, P.136, R.137, I.140, I.244, C.249, C.250, T.251, C.252, R.253, C.255 4 PLIP interactions: 4 interactions with chain Y, Metal complexes: Y:C.135, Y:C.249, Y:C.252, Y:C.255 SF4.68: 10 residues within 4Å: Chain Z: C.10, Y.12, C.13, C.15, S.16, C.17, V.37, C.38, P.162, R.163 4 PLIP interactions: 4 interactions with chain Z, Metal complexes: Z:C.10, Z:C.13, Z:C.17, Z:C.38

4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.2: 36 residues within 4Å: Chain A: V.153, G.154, G.155, G.156, V.157, A.158, I.176, E.177, R.178, T.179, G.184, R.185, L.189, K.191, T.192, F.193, A.343, T.344, G.345, Y.346, A.368, L.369, E.372, F.419, Y.423, K.426, N.514, L.520, G.555, V.556, K.561, D.562, I.563, P.564, T.566 Chain N: K.540 23 PLIP interactions: 22 interactions with chain A, 1 interactions with chain N Hydrophobic interactions: A:L.189, A:Y.346, A:A.368, A:L.369, A:F.419, A:Y.423, A:Y.423 Hydrogen bonds: A:G.155, A:V.157, A:A.158, A:R.178, A:R.178, A:R.185, A:M.186, A:F.193, A:F.193, A:Y.346, A:K.426, A:V.556, A:K.561, A:I.563, N:K.540 pi-Stacking: A:F.193 FAD.13: 29 residues within 4Å: Chain C: G.21, E.22, C.23, G.24, G.25, A.26, V.27, T.28, L.31, A.45, I.46, T.69, A.70, G.71, S.72, L.73, H.74, G.76, T.99, K.101, V.127, N.128, C.129, G.130, G.131, G.206, N.207, W.208, T.219 28 PLIP interactions: 28 interactions with chain C Hydrogen bonds: C:E.22, C:C.23, C:G.24, C:G.25, C:A.26, C:V.27, C:T.28, C:T.28, C:I.46, C:T.69, C:T.69, C:G.71, C:S.72, C:S.72, C:L.73, C:G.76, C:G.76, C:K.101, C:N.128, C:G.130, C:N.207, C:N.207, C:N.207, C:W.208, C:W.208, C:T.219 pi-Stacking: C:W.208 pi-Cation interactions: C:H.74 FAD.36: 36 residues within 4Å: Chain A: K.540 Chain N: V.153, G.154, G.155, G.156, V.157, A.158, I.176, E.177, R.178, T.179, G.184, R.185, L.189, K.191, T.192, F.193, A.343, T.344, G.345, Y.346, A.368, L.369, E.372, F.419, Y.423, K.426, N.514, L.520, G.555, V.556, K.561, D.562, I.563, P.564, T.566 23 PLIP interactions: 22 interactions with chain N, 1 interactions with chain A Hydrophobic interactions: N:L.189, N:Y.346, N:A.368, N:L.369, N:F.419, N:Y.423, N:Y.423 Hydrogen bonds: N:G.155, N:V.157, N:A.158, N:R.178, N:R.178, N:R.185, N:M.186, N:F.193, N:F.193, N:Y.346, N:K.426, N:V.556, N:K.561, N:I.563, A:K.540 pi-Stacking: N:F.193 FAD.47: 29 residues within 4Å: Chain P: G.21, E.22, C.23, G.24, G.25, A.26, V.27, T.28, L.31, A.45, I.46, T.69, A.70, G.71, S.72, L.73, H.74, G.76, T.99, K.101, V.127, N.128, C.129, G.130, G.131, G.206, N.207, W.208, T.219 28 PLIP interactions: 28 interactions with chain P Hydrogen bonds: P:E.22, P:C.23, P:G.24, P:G.25, P:A.26, P:V.27, P:T.28, P:T.28, P:I.46, P:T.69, P:T.69, P:G.71, P:S.72, P:S.72, P:L.73, P:G.76, P:G.76, P:K.101, P:N.128, P:G.130, P:N.207, P:N.207, P:N.207, P:W.208, P:W.208, P:T.219 pi-Stacking: P:W.208 pi-Cation interactions: P:H.74

2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.8: 9 residues within 4Å: Chain B: C.14, W.16, C.43, T.44, G.67, C.68, C.73, H.74, N.79 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.14, B:C.43, B:C.68, B:C.73 FES.42: 9 residues within 4Å: Chain O: C.14, W.16, C.43, T.44, G.67, C.68, C.73, H.74, N.79 4 PLIP interactions: 4 interactions with chain O, Metal complexes: O:C.14, O:C.43, O:C.68, O:C.73

4 x 9S8: Non-cubane [4Fe-4S]-cluster(Non-covalent)

9S8.16: 10 residues within 4Å: Chain D: G.138 Chain E: G.9, C.10, I.11, C.42, C.43, C.79, G.81, C.82, F.237 6 PLIP interactions: 6 interactions with chain E, Metal complexes: E:C.10, E:C.42, E:C.43, E:C.79, E:C.82, E:C.82 9S8.17: 8 residues within 4Å: Chain E: H.154, G.156, C.157, C.197, C.198, C.235, F.237, C.238 7 PLIP interactions: 7 interactions with chain E, pi-Cation interactions: E:H.158 Metal complexes: E:C.157, E:C.197, E:C.198, E:C.235, E:C.238, E:C.238 9S8.50: 10 residues within 4Å: Chain Q: G.138 Chain R: G.9, C.10, I.11, C.42, C.43, C.79, G.81, C.82, F.237 6 PLIP interactions: 6 interactions with chain R, Metal complexes: R:C.10, R:C.42, R:C.43, R:C.79, R:C.82, R:C.82 9S8.51: 8 residues within 4Å: Chain R: H.154, G.156, C.157, C.197, C.198, C.235, F.237, C.238 7 PLIP interactions: 7 interactions with chain R, pi-Cation interactions: R:H.158 Metal complexes: R:C.157, R:C.197, R:C.198, R:C.235, R:C.238, R:C.238

4 x ZN: ZINC ION(Non-covalent)

ZN.21: 4 residues within 4Å: Chain I: H.58, H.60, K.184, D.390 3 PLIP interactions: 3 interactions with chain I Metal complexes: I:H.58, I:H.60, I:D.390 ZN.22: 4 residues within 4Å: Chain I: K.184, H.237, H.276, D.390 2 PLIP interactions: 2 interactions with chain I Metal complexes: I:H.237, I:H.276 ZN.55: 4 residues within 4Å: Chain V: H.58, H.60, K.184, D.390 3 PLIP interactions: 3 interactions with chain V Metal complexes: V:H.58, V:H.60, V:D.390 ZN.56: 4 residues within 4Å: Chain V: K.184, H.237, H.276, D.390 2 PLIP interactions: 2 interactions with chain V Metal complexes: V:H.237, V:H.276

2 x MO: MOLYBDENUM ATOM(Non-covalent)

MO.31: 3 residues within 4Å: Chain M: C.122 Ligands: MGD.32, MGD.33 Ligand excluded by PLIP MO.65: 3 residues within 4Å: Chain Z: C.122 Ligands: MGD.66, MGD.67 Ligand excluded by PLIP

4 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)

MGD.32: 35 residues within 4Å: Chain J: I.10, Q.12, R.13, A.14, V.15, E.17, G.18, M.21, Q.84 Chain M: Y.12, I.40, C.122, W.153, G.154, S.155, N.156, H.159, A.160, I.189, D.190, P.191, R.192, T.194, V.206, Q.208, G.209, D.211, G.259, M.260, G.261, T.265, G.295, H.296 Ligands: MO.31, MGD.33 20 PLIP interactions: 12 interactions with chain M, 8 interactions with chain J Hydrogen bonds: M:N.156, M:A.160, M:I.189, M:R.192, M:R.192, M:Q.208, M:G.209, M:M.260, M:G.261, J:Q.12, J:R.13, J:R.13, J:V.15, J:G.18, J:Q.84 Salt bridges: M:H.161, M:D.211, J:R.13, J:E.17 pi-Stacking: M:Y.12 MGD.33: 34 residues within 4Å: Chain J: T.11, R.13, M.21, K.25, Q.84, A.88, N.89, V.92, Y.104 Chain M: S.95, T.96, C.118, I.121, C.122, M.260, H.264, H.296, Y.297, I.348, G.349, T.350, D.351, H.355, I.372, D.373, P.374, S.375, N.377, V.389, C.390, I.391, C.392 Ligands: MO.31, MGD.32 23 PLIP interactions: 17 interactions with chain M, 6 interactions with chain J Hydrogen bonds: M:S.95, M:H.264, M:Y.297, M:G.349, M:D.351, M:D.351, M:H.355, M:I.372, M:D.373, M:D.373, M:S.375, M:N.377, M:C.392, J:R.13, J:R.13, J:N.89, J:N.89 Salt bridges: M:H.296, M:H.296, M:H.355, M:H.355, J:K.25 pi-Stacking: J:Y.104 MGD.66: 35 residues within 4Å: Chain W: I.10, Q.12, R.13, A.14, V.15, E.17, G.18, M.21, Q.84 Chain Z: Y.12, I.40, C.122, W.153, G.154, S.155, N.156, H.159, A.160, I.189, D.190, P.191, R.192, T.194, V.206, Q.208, G.209, D.211, G.259, M.260, G.261, T.265, G.295, H.296 Ligands: MO.65, MGD.67 20 PLIP interactions: 12 interactions with chain Z, 8 interactions with chain W Hydrogen bonds: Z:N.156, Z:A.160, Z:I.189, Z:R.192, Z:R.192, Z:Q.208, Z:G.209, Z:M.260, Z:G.261, W:Q.12, W:R.13, W:R.13, W:V.15, W:G.18, W:Q.84 Salt bridges: Z:H.161, Z:D.211, W:R.13, W:E.17 pi-Stacking: Z:Y.12 MGD.67: 34 residues within 4Å: Chain W: T.11, R.13, M.21, K.25, Q.84, A.88, N.89, V.92, Y.104 Chain Z: S.95, T.96, C.118, I.121, C.122, M.260, H.264, H.296, Y.297, I.348, G.349, T.350, D.351, H.355, I.372, D.373, P.374, S.375, N.377, V.389, C.390, I.391, C.392 Ligands: MO.65, MGD.66 23 PLIP interactions: 17 interactions with chain Z, 6 interactions with chain W Hydrogen bonds: Z:S.95, Z:H.264, Z:Y.297, Z:G.349, Z:D.351, Z:D.351, Z:H.355, Z:I.372, Z:D.373, Z:D.373, Z:S.375, Z:N.377, Z:C.392, W:R.13, W:R.13, W:N.89, W:N.89 Salt bridges: Z:H.296, Z:H.296, Z:H.355, Z:H.355, W:K.25 pi-Stacking: W:Y.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Watanabe, T. et al., Three-megadalton complex of methanogenic electron-bifurcating and CO 2 -fixing enzymes. Science (2021)

Release Date

2021-09-29

Peptides

CoB--CoM heterodisulfide reductase iron-sulfur subunit A: AN
F420-non-reducing hydrogenase subunit D: BO
Formate dehydrogenase, beta subunit (F420): CP
CoB--CoM heterodisulfide reductase subunit C: DQ
CoB--CoM heterodisulfide reductase subunit B: ER
Formate dehydrogenase: FS
Formylmethanofuran dehydrogenase: GT
Formylmethanofuran dehydrogenase, subunit G: HU
Formylmethanofuran dehydrogenase, subunit A: IV
Formylmethanofuran dehydrogenase, subunit D: JW
Formylmethanofuran dehydrogenase, subunit F: KLXY
Formylmethanofuran dehydrogenase, subunit B: MZ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

N
a

B
F

O
f

C
E

P
e

D
C

Q
c

E
B

R
b

F
D

S
d

G
I

T
i

H
L

U
l

I
G

V
g

J
J

W
j

K
M

L
K

X
m

Y
k

M
H

Z
h

CoB--CoM heterodisulfide reductase iron-sulfur subunit A

F420-non-reducing hydrogenase subunit D

Formate dehydrogenase, beta subunit (F420)

CoB--CoM heterodisulfide reductase subunit C

CoB--CoM heterodisulfide reductase subunit B

Formate dehydrogenase

Formylmethanofuran dehydrogenase

Formylmethanofuran dehydrogenase, subunit G

Formylmethanofuran dehydrogenase, subunit A

Formylmethanofuran dehydrogenase, subunit D

Formylmethanofuran dehydrogenase, subunit F

Formylmethanofuran dehydrogenase, subunit B

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