SMTL ID : 7cje.1 (1 other biounit)

Structural and kinetic characterization of Porphyromonas gingivalis glutaminyl cyclase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: D.149, D.183, W.298, H.299 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.149, A:D.183, A:D.183, A:H.299, H2O.4

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: D.42, F.44, D.314, E.318 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.42, A:F.44, A:D.314, A:E.318, H2O.1, H2O.2

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: Y.228, D.261, G.262, S.287, S.288, K.289 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.261, A:S.287, A:S.288, A:K.289 Water bridges: A:S.288, A:S.288

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lamers, S. et al., Structural and kinetic characterization of Porphyromonas gingivalis glutaminyl cyclase. Biol.Chem. (2021)

Release Date

2021-05-05

Peptides

Glutamine cyclotransferase-related protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glutamine cyclotransferase-related protein

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