SMTL ID : 7cnt.1

Structure of 2,5-dihydroxypridine Dioxygenase from Pseudomonas putida KT2440 in complex with product N-formylmaleamic acid formed via in crystallo reaction with 2,5-dihydroxypridine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

homo-hexamer

Ligands

6 x FE2: FE (II) ION(Non-covalent)

FE2.1: 4 residues within 4Å: Chain A: H.265, S.302, H.318, D.320 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.265, A:S.302, A:H.318, A:D.320 FE2.2: 4 residues within 4Å: Chain B: H.265, S.302, H.318, D.320 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.265, B:H.318, B:D.320 FE2.3: 4 residues within 4Å: Chain C: H.265, S.302, H.318, D.320 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.265, C:S.302, C:H.318, C:D.320 FE2.4: 4 residues within 4Å: Chain D: H.265, S.302, H.318, D.320 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:H.265, D:S.302, D:H.318, D:D.320 FE2.5: 4 residues within 4Å: Chain E: H.265, S.302, H.318, D.320 5 PLIP interactions: 4 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:H.265, E:S.302, E:H.318, E:D.320, H2O.7 FE2.6: 4 residues within 4Å: Chain F: H.265, S.302, H.318, D.320 5 PLIP interactions: 4 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:H.265, F:S.302, F:H.318, F:D.320, H2O.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, G.Q. et al., 2,5-dihydroxypridine Dioxygenase in complex with 2,5-dihydroxypridine and product N-formylmaleamic acid. Nat Commun (2020)

Release Date

2020-12-16

Peptides

2,5-dihydroxypyridine 5,6-dioxygenase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

2,5-dihydroxypyridine 5,6-dioxygenase

Related Entries With Identical Sequence