SMTL ID : 7cv6.1

RNA methyltransferase METTL4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.01 Å

Oligo State

monomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 20 residues within 4Å: Chain A: I.141, S.210, D.211, L.212, D.233, P.235, Y.247, P.248, L.250, S.362, R.363, K.364, E.385, F.387, R.389, E.390, W.398, G.399, N.400, E.401 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:D.211, A:L.212, A:D.233, A:K.364, A:R.389, A:R.389, A:E.390, A:E.390, A:N.400, A:N.400, A:E.401 Water bridges: A:E.401 Salt bridges: A:R.389

2 x A2M: 2'-O-methyladenosine 5'-(dihydrogen phosphate)(Non-covalent)

A2M.2: 13 residues within 4Å: Chain A: R.49, D.233, P.234, W.236, Y.247, T.276, W.303, H.321, K.322, E.325, F.361, S.362, K.364 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:R.49, A:Y.247, A:Y.247, A:E.325, A:K.364 Salt bridges: A:K.305, A:H.321 pi-Cation interactions: A:K.364, A:K.364 A2M.3: 1 residues within 4Å: Chain A: H.214 2 PLIP interactions: 2 interactions with chain A pi-Stacking: A:H.214, A:H.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luo, Q. et al., Structural insights into molecular mechanism for N6-adenosine methylation by MT-A70 family methyltransferase METTL4. Nat Commun (2022)

Release Date

2021-09-01

Peptides

Methyltransferase-like protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Methyltransferase-like protein 2

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