SMTL ID : 7d2u.1

Crystal structure of Rsu1/PINCH1_LIM45C complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.15 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MLI: MALONATE ION(Non-functional Binders)

MLI.1: 7 residues within 4Å: Chain A: N.77, N.78, M.100, R.102, Y.123 Chain B: P.125 Ligands: GOL.2 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.123 Hydrogen bonds: A:N.77 Salt bridges: A:R.102

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: N.101, R.102, Y.123, N.125 Ligands: MLI.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.123

4 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain B: C.10, C.13, H.30, H.33 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.10, B:C.13, B:H.30, B:H.33 ZN.4: 4 residues within 4Å: Chain B: C.36, C.39, C.57, H.60 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.36, B:C.39, B:C.57, B:H.60 ZN.5: 4 residues within 4Å: Chain B: C.69, C.72, C.89, C.92 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.69, B:C.72, B:C.89, B:C.92 ZN.6: 5 residues within 4Å: Chain B: C.95, T.97, C.98, C.117, C.120 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.95, B:C.98, B:C.117, B:C.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, H. et al., Complex structures of Rsu1 and PINCH1 reveal a regulatory mechanism of the ILK/PINCH/Parvin complex for F-actin dynamics. Elife (2021)

Release Date

2021-02-24

Peptides

Ras suppressor protein 1: A
LIM and senescent cell antigen-like-containing domain protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ras suppressor protein 1

LIM and senescent cell antigen-like-containing domain protein 1

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