SMTL ID : 7d5l.1

Discovery of BMS-986144, a Third Generation, Pan Genotype NS3/4A Protease Inhibitor for the Treatment of Hepatitis C Virus Infection

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.112, C.114, C.160, H.164 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.112, A:C.114, A:C.160, A:H.164 ZN.3: 4 residues within 4Å: Chain B: C.112, C.114, C.160, H.164 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.112, B:C.114, B:C.160, B:H.164 ZN.5: 4 residues within 4Å: Chain C: C.112, C.114, C.160, H.164 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.112, C:C.114, C:C.160, C:H.164 ZN.7: 4 residues within 4Å: Chain D: C.112, C.114, C.160, H.164 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.112, D:C.114, D:C.160, D:H.164

4 x GXO: [1,1,1-tris(fluoranyl)-2-methyl-propan-2-yl] ~{N}-[(1~{S},4~{R},6~{S},7~{Z},11~{R},13~{R},14~{S},18~{R})-13-ethyl-18-(7-fluoranyl-6-methoxy-isoquinolin-1-yl)oxy-11-methyl-4-[(1-methylcyclopropyl)sulfonylcarbamoyl]-2,15-bis(oxidanylidene)-3,16-diazatricyclo[14.3.0.0^{4,6}]nonadec-7-en-14-yl]carbamate(Non-covalent)

GXO.2: 22 residues within 4Å: Chain A: Q.56, T.57, F.58, H.72, G.73, D.94, D.96, R.138, I.147, L.150, K.151, G.152, S.153, S.154, F.169, R.170, A.171, A.172, V.173, D.183 Chain D: V.93 Ligands: GXO.8 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Q.56, A:I.147, A:F.169, A:A.171, A:A.172 Hydrogen bonds: A:H.72, A:G.152, A:S.153, A:S.154, A:S.154, A:R.170, A:A.172, A:A.172 Water bridges: A:R.170, A:C.174 GXO.4: 24 residues within 4Å: Chain B: Q.56, T.57, F.58, H.72, G.73, D.94, D.96, R.138, I.147, L.150, K.151, G.152, S.153, S.154, F.169, R.170, A.171, A.172, V.173, C.174, D.183 Chain C: V.93, D.94 Ligands: GXO.6 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:Q.56, B:D.96, B:I.147, B:F.169, B:A.171, B:A.172 Hydrogen bonds: B:H.72, B:G.152, B:S.153, B:S.154, B:S.154, B:R.170, B:A.172, B:A.172 Halogen bonds: B:D.183 GXO.6: 24 residues within 4Å: Chain B: V.93, D.94 Chain C: Q.56, T.57, F.58, H.72, G.73, D.94, D.96, R.138, I.147, L.150, K.151, G.152, S.153, S.154, F.169, R.170, A.171, A.172, V.173, C.174, D.183 Ligands: GXO.4 18 PLIP interactions: 18 interactions with chain C Hydrophobic interactions: C:Q.56, C:F.58, C:D.96, C:I.147, C:F.169, C:A.171, C:A.172 Hydrogen bonds: C:H.72, C:G.152, C:S.153, C:S.154, C:S.154, C:R.170, C:A.172, C:A.172 Water bridges: C:R.170, C:C.174 Halogen bonds: C:D.183 GXO.8: 24 residues within 4Å: Chain A: V.93, D.94 Chain D: Q.56, T.57, F.58, H.72, G.73, D.94, D.96, R.138, I.147, L.150, K.151, G.152, S.153, S.154, F.169, R.170, A.171, A.172, V.173, C.174, D.183 Ligands: GXO.2 17 PLIP interactions: 17 interactions with chain D Hydrophobic interactions: D:Q.56, D:F.58, D:D.96, D:I.147, D:F.169, D:F.169, D:A.171, D:A.172 Hydrogen bonds: D:H.72, D:G.152, D:S.153, D:S.154, D:R.170, D:A.172, D:A.172 Water bridges: D:R.170, D:C.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sun, L.Q. et al., Discovery of BMS-986144, a Third-Generation, Pan-Genotype NS3/4A Protease Inhibitor for the Treatment of Hepatitis C Virus Infection. J.Med.Chem. (2020)

Release Date

2020-12-16

Peptides

NS3/4A Protease: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
D

D
E

NS3/4A Protease

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