SMTL ID : 7dlv.1 (1 other biounit)

shrimp dUTPase in complex with Stl

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

hetero-3-3-mer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: K.15, A.20, F.21, T.22 Chain D: V.57, H.75 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain D Hydrogen bonds: A:T.22 Salt bridges: A:K.15, D:H.75 SO4.3: 3 residues within 4Å: Chain A: K.121 Chain B: K.121 Chain C: K.121 3 PLIP interactions: 1 interactions with chain C, 1 interactions with chain A, 1 interactions with chain B Salt bridges: C:K.121, A:K.121, B:K.121 SO4.4: 5 residues within 4Å: Chain C: K.15, A.20, F.21, T.22 Chain F: H.75 4 PLIP interactions: 3 interactions with chain C, 1 interactions with chain F Hydrogen bonds: C:T.22, C:T.22 Salt bridges: C:K.15, F:H.75 SO4.5: 2 residues within 4Å: Chain F: K.33, R.37 2 PLIP interactions: 2 interactions with chain F Salt bridges: F:K.33, F:R.37

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 3 residues within 4Å: Chain A: D.80 Chain B: D.80 Chain C: D.80 3 PLIP interactions: 1 interactions with chain A, 1 interactions with chain C, 1 interactions with chain B Metal complexes: A:D.80, C:D.80, B:D.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, F. et al., Structural basis of staphylococcal Stl inhibition on a eukaryotic dUTPase. Int.J.Biol.Macromol. (2021)

Release Date

2021-12-01

Peptides

shrimp dUTPase: ABC
Orf20: DEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

shrimp dUTPase

Orf20

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