SMTL ID : 7dml.2 (3 other biounits)

OXA-48 carbapenemase in complex with (R)-2-(1-hydroxy-1,3-dihydrobenzo[c][1,2]oxaborol-3-yl)acrylic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x H9O: 2-[(3R)-1-oxidanyl-3H-2,1-benzoxaborol-3-yl]prop-2-enoic acid(Covalent)

H9O.1: 11 residues within 4Å: Chain A: A.69, S.70, K.73, I.102, W.105, S.118, V.120, T.209, G.210, Y.211, R.250 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.102, A:W.105, A:W.105, A:V.120 Hydrogen bonds: A:S.70, A:S.118, A:T.209, A:Y.211, A:Y.211 Salt bridges: A:K.208, A:R.250

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiao, Y.C. et al., Design and enantioselective synthesis of 3-(alpha-acrylic acid) benzoxaboroles to combat carbapenemase resistance. Chem.Commun.(Camb.) (2021)

Release Date

2021-12-15

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-lactamase

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