SMTL ID : 7ean.1

immune complex of SARS-CoV-2 RBD and cross-neutralizing antibody 6D6

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.91 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: F.20, G.21, F.24, N.25, L.50 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.24

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, T. et al., Cross-neutralizing antibodies bind a SARS-CoV-2 cryptic site and resist circulating variants. Nat Commun (2021)

Release Date

2021-03-31

Peptides

Spike protein S1: A
Heavy chain of SARS-CoV-2 cross-neutralizing mAb 6D6: B
Light chain of SARS-CoV-2 cross-neutralizing mAb 6D6: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Spike protein S1

Heavy chain of SARS-CoV-2 cross-neutralizing mAb 6D6

Light chain of SARS-CoV-2 cross-neutralizing mAb 6D6

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