- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 2 x J1O: 4-[[(2R)-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]butanoic acid(Non-covalent)
J1O.2: 15 residues within 4Å:- Chain A: N.59, S.61, S.62, G.63, R.64, R.65, A.178, A.179, A.180, V.181, F.230, L.232, N.258, R.263
- Ligands: ANP.1
19 PLIP interactions:16 interactions with chain A, 3 interactions with chain B- Hydrophobic interactions: A:L.232
- Hydrogen bonds: A:N.59, A:S.62, A:S.62, A:S.62, A:G.63, A:R.64, A:R.65, A:R.65, A:R.65, A:A.178, A:V.181, A:N.258
- Water bridges: A:G.43, A:G.66, B:K.195, B:K.195
- Salt bridges: A:R.263, B:K.195
J1O.8: 15 residues within 4Å:- Chain B: N.59, S.61, S.62, G.63, R.64, R.65, A.178, A.179, A.180, V.181, F.230, L.232, N.258, R.263
- Ligands: ANP.7
19 PLIP interactions:16 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:L.232
- Hydrogen bonds: B:N.59, B:S.62, B:S.62, B:S.62, B:G.63, B:R.64, B:R.65, B:R.65, B:R.65, B:A.178, B:V.181, B:N.258
- Water bridges: B:G.43, B:G.66, A:K.195, A:K.195
- Salt bridges: B:R.263, A:K.195
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.3: 4 residues within 4Å:- Chain A: D.183, K.212
- Chain B: K.195
- Ligands: ANP.1
3 PLIP interactions:1 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.183, H2O.1, H2O.1
MG.9: 4 residues within 4Å:- Chain A: K.195
- Chain B: D.183, K.212
- Ligands: ANP.7
3 PLIP interactions:1 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:D.183, H2O.5, H2O.5
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain A: G.15, A.16, A.17, R.18
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:G.15, A:A.17, A:R.18
SO4.5: 2 residues within 4Å:- Chain A: F.306, I.307
No protein-ligand interaction detected (PLIP)SO4.10: 4 residues within 4Å:- Chain B: G.15, A.16, A.17, R.18
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:G.15, B:A.17, B:R.18
SO4.11: 2 residues within 4Å:- Chain B: F.306, I.307
No protein-ligand interaction detected (PLIP)- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.6: 7 residues within 4Å:- Chain A: G.109, P.110, A.111, L.116
- Chain B: E.122, A.129, R.133
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:E.122, B:E.122, B:R.133, A:A.111
- Water bridges: B:G.127, B:G.127
GOL.12: 7 residues within 4Å:- Chain A: E.122, A.129, R.133
- Chain B: G.109, P.110, A.111, L.116
5 PLIP interactions:1 interactions with chain B, 4 interactions with chain A- Hydrogen bonds: B:A.111, A:E.122, A:R.133
- Water bridges: A:G.127, A:G.127
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mostert, K.J. et al., The Coenzyme A Level Modulator Hopantenate (HoPan) Inhibits Phosphopantotenoylcysteine Synthetase Activity. Acs Chem.Biol. (2021)
- Release Date
- 2021-11-24
- Peptides
- Phosphopantothenate--cysteine ligase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 2 x J1O: 4-[[(2R)-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]butanoic acid(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mostert, K.J. et al., The Coenzyme A Level Modulator Hopantenate (HoPan) Inhibits Phosphopantotenoylcysteine Synthetase Activity. Acs Chem.Biol. (2021)
- Release Date
- 2021-11-24
- Peptides
- Phosphopantothenate--cysteine ligase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
C