SMTL ID : 7ela.1

Structure of Lassa virus polymerase in complex with 3'-vRNA and Z mutant (F36A)

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.31, C.34, C.50, C.53 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.31, A:C.34, A:C.50, A:C.53 ZN.2: 4 residues within 4Å: Chain A: C.44, H.47, C.64, C.67 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.44, A:H.47, A:C.64, A:C.67

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.3: 4 residues within 4Å: Chain C: M.1191, D.1192, D.1334, E.1384 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:D.1192, C:E.1384

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, X. et al., Cryo-EM structures of Lassa and Machupo virus polymerases complexed with cognate regulatory Z proteins identify targets for antivirals. Nat Microbiol (2021)

Release Date

2021-05-05

Peptides

RING finger protein Z: A
RNA-directed RNA polymerase L: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C
A

RING finger protein Z

RNA-directed RNA polymerase L

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