SMTL ID : 7erx.1

Glycosyltransferase in complex with UDP and STB

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: H.27, L.150, G.359, W.360, N.361, D.381 Ligands: UDP.2, JC6.3 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:L.150, A:W.360, A:D.381 Water bridges: A:L.150, A:L.150, A:Q.382

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.2: 16 residues within 4Å: Chain A: G.26, L.29, R.255, G.281, S.282, E.283, W.339, V.340, Q.342, H.357, G.359, W.360, N.361, S.362, E.365 Ligands: GOL.1 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:G.26, A:R.255, A:R.255, A:S.282, A:E.283, A:V.340, A:V.340, A:Q.342, A:N.361, A:N.361, A:S.362, A:E.365 Water bridges: A:L.280, A:Q.382, A:Q.382 Salt bridges: A:H.357, A:H.357 pi-Stacking: A:W.339

1 x JC6: Steviolbioside(Non-covalent)

JC6.3: 16 residues within 4Å: Chain A: W.22, H.27, T.88, H.93, V.129, F.130, M.155, I.159, L.204, A.205, F.208, E.283, F.379, G.380, D.381 Ligands: GOL.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.129, A:F.130, A:I.159, A:A.205, A:F.208, A:F.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, J. et al., Catalytic flexibility of rice glycosyltransferase OsUGT91C1 for the production of palatable steviol glycosides. Nat Commun (2021)

Release Date

2021-12-08

Peptides

Glycosyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycosyltransferase

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