SMTL ID : 7ff6.1

The 0.83 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with cis-vaccenic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.83 Å

Oligo State

monomer

Ligands

1 x 4IF: cis-vaccenic acid(Non-covalent)

4IF.1: 13 residues within 4Å: Chain A: Y.20, M.21, T.30, A.34, P.39, T.54, F.58, K.59, T.61, D.77, L.116, R.127, Y.129 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.20, A:T.30, A:P.39, A:T.54, A:F.58, A:K.59 Hydrogen bonds: A:Y.129 Water bridges: A:T.41, A:R.107, A:R.107 Salt bridges: A:R.127

2 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)

P6G.2: 7 residues within 4Å: Chain A: L.11, V.12, D.13, S.35, M.36, T.37, K.38 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.38 P6G.3: 3 residues within 4Å: Chain A: D.48, I.49, K.66 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.48, A:K.66

1 x GLP: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose(Non-covalent)

GLP.4: 6 residues within 4Å: Chain A: K.59, N.60, T.74, T.75, A.76, D.78 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.60, A:T.74, A:T.74 Salt bridges: A:K.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sugiyama, S. et al., The 0.83 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with cis-vaccenic acid. To Be Published

Release Date

2022-07-27

Peptides

Fatty acid-binding protein, heart: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein, heart

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