SMTL ID : 7h4c.1

Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z954606858 (A71EV2A-x0719)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.37 Å

Oligo State

monomer

Ligands

2 x VW4: (2S)-2-phenylpropane-1-sulfonamide(Non-covalent)

VW4.1: 2 residues within 4Å: Chain A: H.25, W.28 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:H.25, A:W.28, A:W.28 Hydrogen bonds: A:H.25 pi-Stacking: A:H.25 VW4.2: 10 residues within 4Å: Chain A: V.84, E.85, S.87, S.105, E.106, P.107, C.110, S.125, T.126, G.127 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:P.107 Hydrogen bonds: A:E.85, A:S.87, A:G.127

1 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: C.56, C.58, C.116, H.118 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.56, A:C.58, A:C.116, A:H.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lithgo, R.M. et al., Crystallographic Fragment Screen of Coxsackievirus A16 2A Protease identifies new opportunities for the development of broad-spectrum anti-enterovirals. Biorxiv (2024)

Release Date

2024-04-24

Peptides

Protease 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protease 2A

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