SMTL ID : 7h4j.1

Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z53825020 (A71EV2A-x0875)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

monomer

Ligands

2 x TE0: 1-(ethanesulfonyl)piperidine-4-carboxylic acid(Non-covalent)

TE0.1: 5 residues within 4Å: Chain A: G.61, V.62, R.115, C.116, Q.117 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Q.117 TE0.2: 11 residues within 4Å: Chain A: H.21, L.22, S.87, Y.90, E.106, P.107, G.108, D.109, C.110, S.125, G.127 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Y.90, A:P.107 Hydrogen bonds: A:S.87, A:G.108, A:C.110 Water bridges: A:G.127 Salt bridges: A:H.21

1 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: C.56, C.58, C.116, H.118 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.56, A:C.58, A:C.116, A:H.118

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 1 residues within 4Å: Chain A: V.102 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lithgo, R.M. et al., Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease. To Be Published

Release Date

2024-04-24

Peptides

Protease 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protease 2A

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