SMTL ID : 7h4y.1

Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z362043378 (A71EV2A-x1146)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

monomer

Ligands

1 x T63: 2-phenylpyrimidin-5-ol(Non-covalent)

T63.1: 3 residues within 4Å: Chain A: H.25, W.28, A.29 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:H.25, A:W.28 pi-Cation interactions: A:H.25

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.56, C.58, C.116, H.118 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.56, A:C.58, A:C.116, A:H.118

3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 3 residues within 4Å: Chain A: D.35, S.36, S.37 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.35, A:S.36, A:S.37 Salt bridges: A:D.35 DMS.4: 1 residues within 4Å: Chain A: H.71 1 PLIP interactions: 1 interactions with chain A pi-Cation interactions: A:Y.64 DMS.5: 1 residues within 4Å: Chain A: G.103 1 PLIP interactions: 1 interactions with chain A Water bridges: A:H.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lithgo, R.M. et al., Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease. To Be Published

Release Date

2024-04-24

Peptides

Protease 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protease 2A

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