SMTL ID : 7jm1.1

Crystal structure of aminoglycoside resistance enzyme ApmA, complex with acetyl-CoA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

homo-trimer

Ligands

3 x ACO: ACETYL COENZYME *A(Non-covalent)

ACO.1: 25 residues within 4Å: Chain A: Y.102, S.124, I.125, N.126, Y.184, I.185, G.186, A.187, I.204, G.206, S.207, V.220, V.222, K.229 Chain C: H.132, A.133, N.134, H.135, L.137, F.190, N.192, V.210, L.212, V.224, P.225 18 PLIP interactions: 12 interactions with chain A, 6 interactions with chain C Hydrophobic interactions: A:Y.102, A:Y.184, A:I.204, A:V.220, C:F.190 Hydrogen bonds: A:Y.102, A:Y.184, A:A.187, A:S.207, A:S.207, C:A.133, C:N.134, C:N.192 Water bridges: A:R.227, A:R.227, C:N.134, C:R.227 Salt bridges: A:K.229 ACO.2: 23 residues within 4Å: Chain A: H.132, A.133, N.134, L.137, F.190, V.210, L.212, V.224, P.225 Chain B: Y.102, I.125, N.126, Y.184, I.185, G.186, A.187, I.204, G.206, S.207, V.222, G.223, K.229, R.230 23 PLIP interactions: 14 interactions with chain B, 9 interactions with chain A Hydrophobic interactions: B:Y.102, B:N.126, B:I.204, A:F.190 Hydrogen bonds: B:N.126, B:Y.184, B:A.187, B:S.207, B:S.207, A:H.132, A:A.133, A:N.134 Water bridges: B:G.223, B:K.229, B:K.229, B:K.229, A:N.134, A:N.134, A:K.167, A:K.167 Salt bridges: B:K.229, B:R.230, A:K.167 ACO.3: 24 residues within 4Å: Chain B: H.132, A.133, N.134, L.137, F.190, V.210, L.212, V.224, P.225 Chain C: Y.102, S.124, I.125, N.126, Y.184, I.185, G.186, A.187, I.204, G.206, S.207, V.220, V.222, K.229, R.230 18 PLIP interactions: 15 interactions with chain C, 3 interactions with chain B Hydrophobic interactions: C:Y.102, C:Y.184, C:Y.184, C:I.204, C:V.220, B:F.190 Hydrogen bonds: C:N.126, C:A.187, C:S.207, C:S.207, B:A.133, B:N.134 Water bridges: C:G.127, C:G.223, C:K.229, C:K.229 Salt bridges: C:K.229, C:R.230

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stogios, P.J., Crystal structure of aminoglycoside resistance enzyme ApmA, complex with acetyl-CoA. To Be Published

Release Date

2020-09-16

Peptides

Aminocyclitol acetyltransferase ApmA: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Aminocyclitol acetyltransferase ApmA

Related Entries With Identical Sequence