SMTL ID : 7jsp.1

Crystal structure of the second bromodomain (BD2) of human TAF1 bound to ATR kinase inhibitor AZD6738

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x VJM: 4-(4-{1-[(R)-amino(hydroxy)methyl-lambda~4~-sulfanyl]cyclopropyl}-6-[(3R)-3-methylmorpholin-4-yl]pyrimidin-2-yl)-1H-pyrrolo[2,3-b]pyridine(Non-covalent)

VJM.1: 13 residues within 4Å: Chain A: W.28, P.29, F.30, H.32, P.33, V.34, N.35, F.38, V.39, Y.42, Y.84, N.85, Y.91 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.34, A:F.38 Hydrogen bonds: A:N.35, A:N.85 Water bridges: A:P.33 pi-Stacking: A:W.28

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 1 residues within 4Å: Chain A: R.67 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.67, A:R.67

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: K.83, Y.84, N.85, G.86 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karim, R.M. et al., Discovery of Dual TAF1-ATR Inhibitors and Ligand-Induced Structural Changes of the TAF1 Tandem Bromodomain. J.Med.Chem. (2022)

Release Date

2021-08-25

Peptides

Transcription initiation factor TFIID subunit 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcription initiation factor TFIID subunit 1

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