SMTL ID : 7jtc.1

Crystal structure of the second bromodomain (BD2) of human TAF1 bound to ZS1-322

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x VK1: 1-{6-[(3R)-3-methylmorpholin-4-yl]-2-(methylsulfanyl)pyrimidin-4-yl}cyclopropane-1-sulfonimidoamide(Non-covalent)

VK1.1: 12 residues within 4Å: Chain A: W.28, P.29, F.30, H.32, P.33, V.34, N.35, F.38, Y.42, Y.84, N.85, Y.91 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.34, A:Y.42, A:Y.84 Hydrogen bonds: A:N.35, A:N.85 pi-Stacking: A:W.28

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 1 residues within 4Å: Chain A: D.26 No protein-ligand interaction detected (PLIP) EDO.3: 2 residues within 4Å: Chain A: E.68, D.72 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karim, M.R. et al., Crystal structure of the second bromodomain (BD2) of human TAF1 bound to ZS1-322. To Be Published

Release Date

2021-08-25

Peptides

Transcription initiation factor TFIID subunit 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcription initiation factor TFIID subunit 1

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