SMTL ID : 7jvn.2 (1 other biounit)

Non-receptor Protein Tyrosine Phosphatase SHP2 in Complex with Allosteric Inhibitor Compound 24

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

monomer

Ligands

1 x VKP: 6-(4-amino-4-methylpiperidin-1-yl)-3-[(2,3-dichlorophenyl)sulfanyl]pyrazin-2-amine(Non-covalent)

VKP.1: 16 residues within 4Å: Chain A: E.110, R.111, F.113, H.114, N.217, T.218, T.219, E.249, E.250, T.253, L.254, Q.257, D.489, P.491, K.492, Q.495 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:P.491, A:K.492 Hydrogen bonds: A:R.111, A:F.113, A:E.249, A:E.250 Water bridges: A:T.253 pi-Cation interactions: A:R.111

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 5 residues within 4Å: Chain A: R.32, S.34, K.35, S.36, T.42 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.35, A:S.36, A:S.36, A:S.36 Water bridges: A:R.32 Salt bridges: A:R.32 PO4.3: 4 residues within 4Å: Chain A: F.346, Q.347, N.349, R.413 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.413 PO4.4: 4 residues within 4Å: Chain A: R.138, E.139, V.148, M.171 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

LaMarche, M.J. et al., Identification of TNO155, an Allosteric SHP2 Inhibitor for the Treatment of Cancer. J.Med.Chem. (2020)

Release Date

2020-09-23

Peptides

Tyrosine-protein phosphatase non-receptor type 11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tyrosine-protein phosphatase non-receptor type 11

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