SMTL ID : 7jz4.1 (1 other biounit)

Crystal structure of broadly Plasmodium RIFIN reactive LAIR1-inserted antibody MGD21

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

hetero-1-1-mer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 3 residues within 4Å: Chain A: T.141, E.156, Y.188 No protein-ligand interaction detected (PLIP) PO4.2: 1 residues within 4Å: Chain A: K.355 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.355 PO4.3: 3 residues within 4Å: Chain A: T.130, R.169, R.171 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.130 Salt bridges: A:R.169, A:R.171

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 4 residues within 4Å: Chain A: D.198, A.222 Chain B: H.28, N.30 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:A.222, B:N.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, K. et al., Structural basis of LAIR1 targeting by polymorphic Plasmodium RIFINs. Nat Commun (2021)

Release Date

2021-05-26

Peptides

MGD21 heavy chain: A
MGD21 light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

MGD21 heavy chain

MGD21 light chain

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