SMTL ID : 7jz4.2 (1 other biounit)

Crystal structure of broadly Plasmodium RIFIN reactive LAIR1-inserted antibody MGD21

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: N.30, N.92 Chain B: A.222, C.223 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.92, B:C.223

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 7 residues within 4Å: Chain A: Q.37, R.39, K.45, P.59, R.61, F.62, D.82 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.37, A:R.61, A:D.82 Salt bridges: A:R.39, A:K.45 PO4.3: 2 residues within 4Å: Chain B: S.127, H.128 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:H.128 Water bridges: B:G.126, B:D.173 Salt bridges: B:H.128

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, K. et al., Structural basis of LAIR1 targeting by polymorphic Plasmodium RIFINs. Nat Commun (2021)

Release Date

2021-05-26

Peptides

MGD21 light chain: A
MGD21 heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

MGD21 light chain

MGD21 heavy chain

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