SMTL ID : 7kd4.1 (1 other biounit)

Structure of the C-terminal domain of the Menangle virus phosphoprotein (residues 329 -388), fused to MBP. Space group P21.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.31 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 16 residues within 4Å: Chain A: N.13, D.15, K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, M.331, W.341, R.345 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:W.63, A:R.67, A:R.67, A:Y.156, A:R.345 Water bridges: A:D.66

9 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain A: K.252 5 PLIP interactions: 5 interactions with chain A Water bridges: A:K.252, A:K.252, A:K.252, A:K.252 Salt bridges: A:K.252 SO4.3: 3 residues within 4Å: Chain A: Q.399, R.402, Q.403 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.399, A:Q.403 Salt bridges: A:R.402 SO4.4: 1 residues within 4Å: Chain A: S.74 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.74 Water bridges: A:Q.73, A:S.74, A:Q.408 SO4.5: 1 residues within 4Å: Chain A: R.427 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.427 SO4.6: 4 residues within 4Å: Chain A: R.99, Y.100, N.101, G.102 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.101, A:G.102 Water bridges: A:R.99, A:N.333, A:N.333 Salt bridges: A:R.99 SO4.7: 5 residues within 4Å: Chain A: S.271, P.272, K.274, N.398, A.400 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.398 Water bridges: A:N.398, A:K.401 Salt bridges: A:K.274 SO4.8: 2 residues within 4Å: Chain A: N.235, K.298 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.235 Water bridges: A:K.298, A:K.298 Salt bridges: A:K.298 SO4.9: 2 residues within 4Å: Chain A: K.401, R.427 8 PLIP interactions: 8 interactions with chain A Water bridges: A:K.401, A:K.401, A:S.428, A:A.429, A:A.429, A:A.429 Salt bridges: A:K.401, A:R.427 SO4.10: 5 residues within 4Å: Chain A: N.151, Q.153, E.154, D.210, Y.211 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.151, A:Y.211 Water bridges: A:E.154, A:E.154, A:E.154, A:E.154, A:S.212

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Webby, M.N. et al., Structural Analysis of the Menangle Virus P Protein Reveals a Soft Boundary between Ordered and Disordered Regions. Viruses (2021)

Release Date

2021-09-15

Peptides

Maltodextrin-binding protein and Phosphoprotein fusion protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Maltodextrin-binding protein and Phosphoprotein fusion protein

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