SMTL ID : 7kfk.1 (1 other biounit)

Crystal structure of LILRB1 D3D4 domain in complex with Plasmodium RIFIN (PF3D7_1373400) V2 domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.63 Å

Oligo State

hetero-1-1-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: H.80, N.81, S.84 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.80 NAG.2: 2 residues within 4Å: Chain A: E.119, N.120 No protein-ligand interaction detected (PLIP) NAG.3: 3 residues within 4Å: Chain A: Q.58, N.60 Chain B: G.103 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.58, A:N.60

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 3 residues within 4Å: Chain A: R.42 Chain B: P.75, F.76 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:F.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, Y. et al., Structural basis of malaria RIFIN binding by LILRB1-containing antibodies. Nature (2021)

Release Date

2021-03-31

Peptides

Isoform 2 of Leukocyte immunoglobulin-like receptor subfamily B member 1: A
Rifin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

Isoform 2 of Leukocyte immunoglobulin-like receptor subfamily B member 1

Rifin

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