SMTL ID : 7kjm.1 (1 other biounit)

CRYSTAL STRUCTURE OF HUMAN MDM2 IN COMPLEX WITH D-PEPTIDE INHIBITOR (DPMI-OMEGA)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 5 residues within 4Å: Chain A: K.70, E.71, H.72, R.73, K.74 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.73, A:R.73, A:R.73, A:K.74

1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.2: 7 residues within 4Å: Chain A: F.31, G.34, Q.35 Chain B: W.3, E.6, X.7, L.10 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Q.35

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: K.7, P.8, L.9 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: S.66, F.67 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tolbert, W.D. et al., CRYSTAL STRUCTURE OF HUMAN MDM2 IN COMPLEX WITH D-PEPTIDE INHIBITOR(DPMI-OMEGA). To Be Published

Release Date

2021-11-17

Peptides

E3 ubiquitin-protein ligase Mdm2: A
D-PMI-omega: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E3 ubiquitin-protein ligase Mdm2

D-PMI-omega

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