SMTL ID : 7l3l.1 (1 other biounit)

Structure of TRAF5 and TRAF6 RING Hetero dimer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

7 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.23, C.26, C.43, C.46 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.23, A:C.26, A:C.43, A:C.46 ZN.2: 4 residues within 4Å: Chain A: C.38, H.40, C.59, D.62 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.38, A:H.40, A:C.59, A:D.62 ZN.3: 5 residues within 4Å: Chain A: C.88, N.90, C.94, H.106, C.110 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.88, A:C.94, A:H.106, A:C.110 ZN.4: 5 residues within 4Å: Chain A: C.117, N.119, C.122, H.134, C.139 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:C.122, A:C.139 ZN.5: 5 residues within 4Å: Chain B: Q.3, C.19, C.22, C.39, C.42 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.19, B:C.22, B:C.39, B:C.42 ZN.6: 4 residues within 4Å: Chain B: C.34, H.36, C.54, D.57 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.34, B:C.54, B:D.57, B:D.57 ZN.7: 5 residues within 4Å: Chain B: C.83, N.85, C.88, H.100, C.104 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.83, B:C.88, B:H.100, B:C.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Das, A. et al., The structure and ubiquitin binding properties of TRAF RING heterodimers. J.Mol.Biol. (2021)

Release Date

2021-02-17

Peptides

TNF receptor-associated factor 5: A
TNF receptor-associated factor 6: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

TNF receptor-associated factor 5

TNF receptor-associated factor 6

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