SMTL ID : 7l3l.2 (1 other biounit)

Structure of TRAF5 and TRAF6 RING Hetero dimer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

7 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.23, C.26, C.43, C.46 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.23, A:C.43, A:C.46 ZN.2: 4 residues within 4Å: Chain A: C.38, H.40, C.59, D.62 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:C.38, A:H.40, A:C.59, A:D.62, A:D.62 ZN.3: 4 residues within 4Å: Chain A: C.88, C.94, H.106, C.110 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.88, A:C.94, A:H.106, A:C.110 ZN.4: 4 residues within 4Å: Chain A: C.117, C.122, H.134, C.139 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.117, A:H.134, A:C.139 ZN.5: 4 residues within 4Å: Chain B: C.19, C.22, C.39, C.42 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.19, B:C.22, B:C.39, B:C.42 ZN.6: 5 residues within 4Å: Chain B: C.34, H.36, C.54, V.56, D.57 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:C.34, B:H.36, B:C.54, B:D.57, B:D.57 ZN.7: 4 residues within 4Å: Chain B: C.83, N.85, C.88, H.100 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:C.83, B:C.88, B:H.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Das, A. et al., The structure and ubiquitin binding properties of TRAF RING heterodimers. J.Mol.Biol. (2021)

Release Date

2021-02-17

Peptides

TNF receptor-associated factor 5: A
TNF receptor-associated factor 6: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

TNF receptor-associated factor 5

TNF receptor-associated factor 6

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