SMTL ID : 7luf.2 (1 other biounit)

HSV1 polymerase ternary complex with dsDNA and PNU-183792

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

monomer

Ligands

1 x YE4: N-(4-chlorobenzyl)-1-methyl-6-(morpholinomethyl)-4-oxo-1,4-dihydroquinoline-3-carboxamide(Non-covalent)

YE4.1: 13 residues within 4Å: Chain A: Q.583, Q.584, L.687, Y.688, P.689, S.782, G.785, F.786, V.789, T.853 Chain B: G.4, G.5 Chain C: C.23 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.789 Hydrogen bonds: A:L.687, A:Y.688

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hayes, R.P. et al., Structural understanding of non-nucleoside inhibition in an elongating herpesvirus polymerase. Nat Commun (2021)

Release Date

2021-04-07

Peptides

DNA polymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

DNA polymerase

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