SMTL ID : 7luy.1 (2 other biounits)

Crystal Structure of guanylate kinase from Bartonella henselae str. Houston-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: G.50, A.51, G.52, K.53, S.54, T.55 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.47, A:G.50, A:A.51, A:G.52, A:G.52, A:K.53, A:S.54, A:S.54, A:T.55 SO4.2: 3 residues within 4Å: Chain A: K.142, H.193, S.196 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.196, A:S.196 Water bridges: A:R.195 Salt bridges: A:K.142, A:H.193 SO4.4: 3 residues within 4Å: Chain A: R.78, H.111, R.183 4 PLIP interactions: 4 interactions with chain A Water bridges: A:N.186 Salt bridges: A:R.78, A:H.111, A:R.183 SO4.5: 3 residues within 4Å: Chain B: Y.138, H.193, S.196 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.138 Salt bridges: B:H.193

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 2 residues within 4Å: Chain A: K.96, R.99 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.96, A:R.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abendroth, J. et al., Crystal Structure of guanylate kinase from Bartonella henselae str. Houston-1. to be published

Release Date

2021-03-17

Peptides

Guanylate kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
F

Guanylate kinase

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