SMTL ID : 7mai.1

HIV-1 Protease (I84V) in Complex with PU5 (LR4-47)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

homo-dimer

Ligands

1 x XVJ: diethyl [(4-{(2S,3R)-4-{[(1,3-benzothiazol-6-yl)sulfonyl][(2S)-2-methylbutyl]amino}-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxybutyl}phenoxy)methyl]phosphonate(Non-covalent)

XVJ.1: 30 residues within 4Å: Chain A: L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, V.84 Chain B: L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, G.52, F.53, P.81, V.82, V.84 21 PLIP interactions: 10 interactions with chain A, 11 interactions with chain B Hydrophobic interactions: A:L.23, A:A.28, A:V.32, A:P.81, A:V.82, A:V.82, B:F.53, B:P.81, B:V.82 Hydrogen bonds: A:D.30, A:D.30, B:D.25, B:G.27, B:G.27, B:D.29, B:D.30 Water bridges: A:I.50, B:G.48, B:I.50 Salt bridges: A:D.25, B:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lockbaum, G.J. et al., HIV-1 Protease (I84V) in Complex with PU5 (LR4-47). To Be Published

Release Date

2022-04-06

Peptides

Protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Protease

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