- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 4 residues within 4Å:- Chain A: Q.41, G.42, Y.43, A.49
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.41
- Water bridges: A:S.54
GOL.3: 3 residues within 4Å:- Chain A: H.124, T.125, K.156
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.156, A:K.156
- Water bridges: A:T.125
GOL.4: 3 residues within 4Å:- Chain A: L.166, I.167, D.188
No protein-ligand interaction detected (PLIP)GOL.10: 3 residues within 4Å:- Chain A: R.112
- Chain B: L.85, R.219
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:R.219
- Water bridges: A:R.112
GOL.14: 4 residues within 4Å:- Chain C: Q.41, G.42, Y.43, A.49
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:Q.41
- Water bridges: C:Y.43, C:S.54
GOL.15: 3 residues within 4Å:- Chain C: H.124, T.125, K.156
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:K.156, C:K.156
GOL.16: 3 residues within 4Å:- Chain C: L.166, I.167, D.188
No protein-ligand interaction detected (PLIP)GOL.22: 3 residues within 4Å:- Chain C: R.112
- Chain D: L.85, R.219
2 PLIP interactions:1 interactions with chain C, 1 interactions with chain D- Water bridges: C:R.112
- Hydrogen bonds: D:R.219
- 12 x NA: SODIUM ION(Non-functional Binders)
NA.5: 2 residues within 4Å:- Chain A: H.9, G.11
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.11
- Water bridges: A:H.9
NA.6: 1 residues within 4Å:- Chain A: V.117
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:V.117, A:V.117
- Water bridges: A:E.116
NA.7: 1 residues within 4Å:- Chain A: Q.130
1 PLIP interactions:1 interactions with chain A- Water bridges: A:Q.130
NA.8: 0 residues within 4Å:- (No contacts)
2 PLIP interactions:2 interactions with chain A- Water bridges: A:K.162, A:S.212
NA.11: 0 residues within 4Å:- (No contacts)
1 PLIP interactions:1 interactions with chain B- Water bridges: B:K.162
NA.12: 2 residues within 4Å:- Chain B: H.9, G.11
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:H.9
- Water bridges: B:H.12, B:T.13
NA.17: 2 residues within 4Å:- Chain C: H.9, G.11
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:G.11
NA.18: 1 residues within 4Å:- Chain C: V.117
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:V.117, C:V.117
NA.19: 1 residues within 4Å:- Chain C: Q.130
1 PLIP interactions:1 interactions with chain C- Water bridges: C:Q.130
NA.20: 0 residues within 4Å:- (No contacts)
1 PLIP interactions:1 interactions with chain C- Water bridges: C:K.162
NA.23: 0 residues within 4Å:- (No contacts)
3 PLIP interactions:3 interactions with chain D- Water bridges: D:K.162, D:I.187, D:I.187
NA.24: 2 residues within 4Å:- Chain D: H.9, G.11
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:G.11
- Water bridges: D:T.13
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shatalin, K. et al., Inhibitors of bacterial H 2 S biogenesis targeting antibiotic resistance and tolerance. Science (2021)
- Release Date
- 2021-06-23
- Peptides
- Bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
HC
AD
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 12 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shatalin, K. et al., Inhibitors of bacterial H 2 S biogenesis targeting antibiotic resistance and tolerance. Science (2021)
- Release Date
- 2021-06-23
- Peptides
- Bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
HC
AD
H