- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.81 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CLR: CHOLESTEROL(Non-covalent)
- 10 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)
OLC.2: 1 residues within 4Å:- Chain A: Y.92
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:Y.92
OLC.3: 5 residues within 4Å:- Chain A: G.11, A.12, G.15, L.16, F.19
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:F.19
OLC.4: 5 residues within 4Å:- Chain A: F.82, F.86, P.105, I.108, H.112
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:F.82, A:F.82, A:F.86, A:I.108
OLC.6: 2 residues within 4Å:- Chain A: V.39, F.77
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:F.77
OLC.7: 6 residues within 4Å:- Chain A: K.73, S.74, F.77
- Chain B: I.118, S.122, L.126
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:K.73, A:K.73, A:F.77, A:F.77, B:I.118, B:L.126
OLC.9: 6 residues within 4Å:- Chain A: S.122, L.126
- Chain B: A.70, K.73, S.74, F.77
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:A.70, B:K.73, B:K.73, B:F.77, B:F.77, A:L.126
OLC.10: 3 residues within 4Å:- Chain B: L.32, P.85
- Ligands: OLC.12
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:L.32, B:P.85
OLC.11: 5 residues within 4Å:- Chain B: F.82, P.105, I.108, Y.109, H.112
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:F.82, B:P.105, B:I.108, B:H.112
OLC.12: 4 residues within 4Å:- Chain B: L.80, L.84, P.85
- Ligands: OLC.10
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:L.80, B:L.84, B:P.85
OLC.13: 1 residues within 4Å:- Chain B: I.162
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:I.162
- 1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Alon, A. et al., Structures of the sigma 2 receptor enable docking for bioactive ligand discovery. Nature (2021)
- Release Date
- 2021-12-15
- Peptides
- Sigma intracellular receptor 2: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.81 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CLR: CHOLESTEROL(Non-covalent)
- 10 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)
- 1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Alon, A. et al., Structures of the sigma 2 receptor enable docking for bioactive ligand discovery. Nature (2021)
- Release Date
- 2021-12-15
- Peptides
- Sigma intracellular receptor 2: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D - Membrane
-
We predict this structure to be a membrane protein.