SMTL ID : 7naj.1 (1 other biounit)

Crystal structure of the TIR domain from human SARM1 in complex with ara-2'F-ADPR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x 1LK: 1,4-anhydro-2-deoxy-2-fluoro-5-O-[(S)-hydroxy(phosphonooxy)phosphoryl]-D-arabinitol(Covalent)

1LK.1: 14 residues within 4Å: Chain A: F.9, I.10, S.11, Y.12, R.13, R.14, N.15, F.36, D.38, L.51, K.72, W.82, V.83, E.86 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.12, A:Y.12, A:R.14 Water bridges: A:N.15, A:K.72, A:W.82 Salt bridges: A:R.13, A:K.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shi, Y. et al., Structural basis of SARM1 activation, substrate recognition, and inhibition by small molecules. Mol.Cell (2022)

Release Date

2022-03-23

Peptides

Sterile alpha and TIR motif-containing protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Sterile alpha and TIR motif-containing protein 1

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