SMTL ID : 7nd9.1

EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-253H55L Fab

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-1-1-mer
Ligands
10 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
27 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Dejnirattisai, W. et al., The antigenic anatomy of SARS-CoV-2 receptor binding domain. Cell (2021)
Release Date
2021-03-03
Peptides
Spike glycoprotein: ABC
COVOX-253H55L Fab heavy chain: D
COVOX-253H55L Fab light chain: E
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
H
E
L

Spike glycoprotein

COVOX-253H55L Fab heavy chain

COVOX-253H55L Fab light chain

Related Entries With Identical Sequence

6z43.1 | 6z97.1 | 6zdh.1 | 6zhd.1 | 7nd3.1 | 7nd4.1 | 7nd5.1 | 7nd6.1 | 7nd7.1 | 7nd8.1 | 7nda.1 | 7ndb.1 | 7ndc.1 | 7ndd.1