SMTL ID : 7nh5.1

Co-Crystal Structure of Akt1 in Complex with Covalent-Allosteric Akt Inhibitor 6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 9 residues within 4Å: Chain A: E.17, N.54, F.55, Q.79, I.84, R.86, R.273, Y.326 Ligands: UC8.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.84, A:R.86 Hydrogen bonds: A:N.54, A:Y.326 Salt bridges: A:R.86, A:R.273

1 x UC8: ~{N}-methyl-6-[4-[[4-[2-oxidanylidene-6-(propanoylamino)-3~{H}-benzimidazol-1-yl]piperidin-1-yl]methyl]phenyl]-5-phenyl-pyridine-3-carboxamide(Covalent)

UC8.2: 21 residues within 4Å: Chain A: E.17, N.54, W.80, I.84, E.85, F.161, L.210, T.211, L.264, K.268, V.270, V.271, Y.272, R.273, D.274, I.290, T.291, D.292, C.296, Y.326 Ligands: ACT.1 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:I.84, A:F.161, A:L.210, A:L.210, A:L.264, A:L.264, A:V.270, A:Y.272, A:R.273, A:D.292 Hydrogen bonds: A:N.54, A:E.85, A:N.204, A:Y.326, A:Y.326 Water bridges: A:T.82 Salt bridges: A:D.274 pi-Stacking: A:W.80 pi-Cation interactions: A:R.273

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Quambusch, L. et al., Cellular model system to dissect the isoform-selectivity of Akt inhibitors. Nat Commun (2021)

Release Date

2021-09-08

Peptides

RAC-alpha serine/threonine-protein kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RAC-alpha serine/threonine-protein kinase

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