SMTL ID : 7nyp.1 (1 other biounit)

monomeric acetyl-CoA synthase in closed conformation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 7 residues within 4Å: Chain A: I.151, V.154, C.514, C.600, C.602 Ligands: NI.2, SF4.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.514, A:C.600, A:C.602, H2O.15 NI.2: 7 residues within 4Å: Chain A: F.234, L.532, C.600, G.601, C.602, F.603 Ligands: NI.1 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:C.600, A:C.602

1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.3: 12 residues within 4Å: Chain A: I.151, C.511, L.513, C.514, H.521, C.523, G.531, L.532, C.533, I.536, C.602 Ligands: NI.1 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.511, A:C.514, A:C.523, A:C.533

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 6 residues within 4Å: Chain A: T.36, Y.40, D.264, M.265, V.266, K.267 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.264, A:M.265, A:V.266

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kreibich, J. et al., Ligand binding at the Ni,Ni-[4Fe-4S] cluster of acetyl-CoA synthase. To Be Published

Release Date

2022-04-13

Peptides

CO-methylating acetyl-CoA synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CO-methylating acetyl-CoA synthase

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