SMTL ID : 7o2m.1

Crystal Structure of Unlinked NS2B-NS3 Protease from Zika Virus in Complex with Inhibitor MI-2289

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x UZZ: 1-[(3~{S},6~{S},9~{S},19~{R})-3,6-bis(4-azanylbutyl)-2,5,8,12,15,18-hexakis(oxidanylidene)-9-(phenylmethyl)-1,4,7,11,14,17-hexazacyclotricos-19-yl]guanidine(Non-covalent)

UZZ.1: 17 residues within 4Å: Chain A: G.39, D.40, F.41, S.42 Chain B: H.52, D.130, Y.131, P.132, A.133, S.136, Y.151, G.152, N.153, G.154, V.155, V.156, Y.162 15 PLIP interactions: 14 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:Y.151, B:V.156, B:Y.162, B:Y.162, B:Y.162 Hydrogen bonds: B:S.136, B:G.152, B:N.153, B:G.154, B:Y.162 Water bridges: B:D.130, B:D.130, B:A.133, A:F.41 Salt bridges: B:D.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huber, S. et al., Structure-Based Optimization and Characterization of Macrocyclic Zika Virus NS2B-NS3 Protease Inhibitors. J.Med.Chem. (2022)

Release Date

2022-04-06

Peptides

Genome polyprotein: A
Genome polyprotein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Genome polyprotein

Genome polyprotein

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