SMTL ID : 7o9s.1

Hantaan virus Gn in complex with Fab nnHTN-Gn2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-1-mer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: A.58, W.59, Y.60, K.65 Chain C: S.47 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:S.47, A:Y.60 GOL.2: 4 residues within 4Å: Chain A: V.156, T.157, V.158, T.171 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.158 GOL.3: 7 residues within 4Å: Chain A: Q.40, G.43 Chain B: Q.39, K.40, P.41, G.42, Q.43 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:G.42, B:Q.43, A:Q.40, A:Q.40, A:G.43

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 6 residues within 4Å: Chain C: N.119, T.121, F.122, G.303, I.304, P.305 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:N.119, C:T.121, C:G.303 NAG.5: 5 residues within 4Å: Chain C: E.216, F.259, N.332, H.333, T.334 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:H.333 Hydrogen bonds: C:H.333, C:T.334, C:T.334

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rissanen, I. et al., Structural Basis for a Neutralizing Antibody Response Elicited by a Recombinant Hantaan Virus Gn Immunogen. Mbio (2021)

Release Date

2021-06-23

Peptides

Fab nnHTN-Gn2 Heavy chain: A
Fab nnHTN-Gn2 Light chain: B
Envelope polyprotein: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
A

Fab nnHTN-Gn2 Heavy chain

Fab nnHTN-Gn2 Light chain

Envelope polyprotein

Related Entries With Identical Sequence