SMTL ID : 7p3g.2 (1 other biounit)

EED in complex with compound 4

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.39 Å

Oligo State

monomer

Ligands

1 x 52R: N5-[(5-fluoranyl-2,3-dihydro-1-benzofuran-4-yl)methyl]-N8-methyl-N8-(1-methylpyrazol-3-yl)-[1,2,4]triazolo[4,3-c]pyrimidine-5,8-diamine(Non-covalent)

52R.1: 10 residues within 4Å: Chain A: F.22, Y.73, N.119, K.136, L.165, D.235, Y.290, M.291, R.292, R.339 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.22, A:F.22, A:Y.290, A:Y.290, A:R.292 Hydrogen bonds: A:N.119, A:K.136 pi-Stacking: A:F.22, A:Y.73, A:Y.73, A:Y.290, A:Y.290, A:Y.290 pi-Cation interactions: A:R.292

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bagal, S.K. et al., Diverse, Potent, and Efficacious Inhibitors That Target the EED Subunit of the Polycomb Repressive Complex 2 Methyltransferase. J.Med.Chem. (2021)

Release Date

2021-12-08

Peptides

Polycomb protein EED: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Polycomb protein EED

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